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Detailed information on CNT30150466


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30631438Brachypodium distachyonVigna unguiculata62.5432.0282.08212forward
CNT30709232Brachypodium distachyonGlycine max22.7110.3285.7177forward
CNT30122306Brachypodium distachyonPhyscomitrium patens36.8743.480.8125forward
CNT30393350Brachypodium distachyonTriticum turgidum43.0714.5982.19146forward
CNT30254596Brachypodium distachyonAvena sativa10025.5792.04339forward
CNT30311914Brachypodium distachyonCamelina sativa50.1527.5183.53170forward
CNT3062430Brachypodium distachyonArabidopsis lyrata45.7213.4483.87155forward
CNT30685178Brachypodium distachyonTriticum urartu43.0717.9882.19146forward
CNT30328300Brachypodium distachyonAsparagus officinalis28.0231.8882.1195forward
CNT30558331Brachypodium distachyonPanicum hallii96.7639.6188.72328forward

Expression of CNT30150466

Peptides detected in this lncRNA

>peptide 1 (99 aa)
HLFCQAVFQEPHDSTAQWPGTIAWVVALIHHPISESFGHLKVNFLCLQPIKHFFHIMSAISFTSSFVSWRKTIISSNLFRNSGRKYCFSSSVTRLLILL*

Sequence

>CNT30150466
GCATCTTTTCTGCCAGGCTGTCTTCCAAGAGCCTCATGATAGCACGGCGCAGTGGCCTGGCACCATAGCTTGGGTTGTAGCCCTCATCCACCACCCTATC
TCTGAATCTTTCGGTCACTTGAAGGTCAATTTCCTTTGCCTTCAGCCTATCAAACACTTCTTTCACATAATGTCTGCAATTTCCTTCACCTCCAGCTTTG
TCAGCTGGCGGAAAACAATCATCTCATCCAATCTATTCAGGAACTCAGGCCGGAAGTACTGCTTCAGCTCCTCAGTCACCAGGCTCTTGATCCTGTTGTA
GCTGGTGTCCTTCTCGTCGTAGTCAAGATCGAACCCAAT