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Detailed information on CNT30150432


BLAST search results

BLAST vs Swiss-Prot:
sp|Q85Y15|NDHI_PHODC, E-value = 4e-58

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3045457Brachypodium distachyonPrunus dulcis24.655.5683.8142forward
CNT30589541Brachypodium distachyonMusa acuminata33.6824.2287.63194forward
CNT30438367Brachypodium distachyonAegilops tauschii10.9426.0395.2463reverse complement
CNT30659065Brachypodium distachyonTriticum dicoccoides30.0330.8495.95173forward
CNT30624957Brachypodium distachyonDaucus carota43.5815.7988.05251forward
CNT30327547Brachypodium distachyonAsparagus officinalis37.336.8291.63215forward
CNT30116966Brachypodium distachyonOryza nivara25.174.0593.1145forward

Expression of CNT30150432

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MRCWIEADISLSNQTITSTSIVIPKRRVKMGRIHISP*

>peptide 2 (36 aa)
MGRSIGHTRTQTSQAIHLSNSKWIRPRKSSGVIDFS*

>peptide 3 (36 aa)
ELEYTVHILPSLINSLLDSTQHNYHKIYKLRNQYYN*

Sequence

>CNT30150432
TGAGTTAGAGTATACAGTTCATATTCTTCCGTCATTGATAAACAGCTTGTTGGACAGTACTCAACACAATTACCACAAAATATACAAACTCCGAAATCAA
TACTATAATTAAGCAATTGTTTCCTTTTAACAGCCTTTTCAAATCTCCAATCCACAATGGGGAGATCTATCGGACATACGCGAACACAAACTTCACAAGC
AATACATTTATCAAATTCAAAGTGGATTCGTCCCCGAAAAAGCTCCGGTGTAATTGATTTTTCGTAAGGGTAAATATCCTCTTTTAAAAGTAGCTTAGTC
CCATCTGCTATAGCTTGAAGTAGTCCTAGGGGACCGGCATATTCAGGACCAATGCGTTGTTGGATCGAAGCGGATATTTCTCTTTCTAACCAAACAATTA
CGAGTACTTCTATTGTGATTCCCAAAAGAAGGGTCAAAATGGGTAGAATCCATATAAGTCCATAGATTTCTTTTAATAATTCTGATTTCGAAAAAGAATT
GAGAGTTTCTACCTCTACCCTATCTATTATCATTTCAACGATCAACTTCCCCCATAATGATATCTATACTACCTAA