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Detailed information on CNT30150328


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673843Brachypodium distachyonSetaria viridis21.6814.7392.5467forward
CNT30728061Brachypodium distachyonCorchorus capsularis22.337.2586.9669forward
CNT3015820Brachypodium distachyonZea mays21.6814.6692.5467forward
CNT30722427Brachypodium distachyonTriticum spelta66.3435.4785.37205forward
CNT30706519Brachypodium distachyonPrunus avium21.367.9687.8866forward

Expression of CNT30150328

Peptides detected in this lncRNA

>peptide 1 (46 aa)
ELAKYNSRFTNIKSTVTLAPQFPASKHHQHTKDVQKSSFRRQQKHL*

>peptide 2 (32 aa)
MFKNPVSEGNKSIYKCMNHLKIYPHHKHHQIQ*

Sequence

>CNT30150328
GAACTAGCGAAATATAATTCCAGATTTACTAATATTAAGTCCACAGTTACGCTAGCACCACAATTTCCAGCTTCAAAGCACCATCAACATACAAAAGATG
TTCAAAAATCCAGTTTCCGAAGGCAACAAAAGCATCTATAAGTGTATGAACCACCTAAAGATCTATCCGCACCACAAGCACCACCAAATACAGTAATAGT
AAACACGAGACACATCTACGATAGCAAGACAATGGAACAAGGCCAGGGAAGCGCAGGCAGCAAGTAACACCACTCATTGTTGCAGAAATAAGGTGGTTCA
GATCACCAA