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Detailed information on CNT30150279


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691340Brachypodium distachyonOryza sativa23.5942.4884.3896forward
CNT30519803Brachypodium distachyonSetaria italica33.4214.580.15136forward
CNT30220794Brachypodium distachyonHordeum vulgare24.324.5886.8799forward
CNT30666951Brachypodium distachyonTriticum dicoccoides18.1826.3385.1474forward
CNT30603678Brachypodium distachyonOryza punctata24.829.7482.18101forward

Expression of CNT30150279

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MGSMHSELKGFGSSRPRWCRRCTTRCMAKLWSEGVSS*

>peptide 2 (90 aa)
EIGPSRLFEANRIPVIVPSKLQTMPSHLQQSVPSFHELVRPPSCDSPSRNLRREPFSCSLQELVGEGKEISSTRARLREGRARWDRCTLN*

Sequence

>CNT30150279
CTGAGATAGGCCCCTCAAGGCTCTTTGAAGCCAACAGGATACCAGTGATCGTCCCATCTAAACTGCAGACAATGCCTTCCCACTTGCAGCAATCCGTGCC
ATCCTTCCATGAGCTGGTGAGGCCACCATCCTGTGACAGCCCGTCGAGGAACTTGAGAAGGGAGCCCTTCTCGTGCTCTTTGCAGGAGCTGGTTGGAGAG
GGCAAGGAGATAAGTAGCACAAGAGCAAGGCTGAGGGAAGGAAGAGCGAGATGGGATCGATGCACTCTGAACTGAAGGGGTTCGGCAGCTCAAGGCCGAG
GTGGTGCAGGAGGTGTACCACCAGGTGCATGGCTAAGCTCTGGAGTGAAGGTGTGTCCTCTTGACGCCTCCCAGTTCTCTTGTGGGTTATGTGTTGCTGC
CAGTGGG