Detailed information on CNT30150273


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30552861Brachypodium distachyonOryza glaberrima50.2218.8482.46114forward
CNT3066951Brachypodium distachyonLeersia perrieri33.481.8686.8476forward
CNT30686777Brachypodium distachyonTriticum urartu31.7210.4586.1172forward
CNT30722486Brachypodium distachyonTriticum spelta59.9128.185.29136forward
CNT30575248Brachypodium distachyonOryza barthii50.2236.8982.46114forward
CNT30603683Brachypodium distachyonOryza punctata60.7931.7282.61138forward

Expression of CNT30150273

Peptides detected in this lncRNA

>peptide 1 (41 aa)
GQSAVCTVPANLQCEVRVFFLTARILRRGERLYLRGRRLLP*

Sequence

>CNT30150273
GGCCAATCAGCCGTGTGCACTGTGCCTGCAAATCTGCAATGCGAGGTCCGCGTTTTCTTCTTGACTGCACGAATCCTTCGACGTGGTGAGCGTCTATACT
TGCGAGGCAGGAGACTACTTCCATGATAGTTGGCCTCCTGAATTGATTATTGTCAACACACTTGCAAGCGGCTTCAAGCACCTTCAGCATTTGTTCTTCA
AACCCTGTTCCTCGAAGTGTTGGATCC