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Detailed information on CNT30150229


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30513357Brachypodium distachyonJuglans regia40.9545.795.05303reverse complement
CNT30658798Brachypodium distachyonTriticum dicoccoides41.3510099.02306reverse complement

Expression of CNT30150229

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MISSWSERMISHTGTETRPRLLREAAVGNFPQWAKA*

>peptide 2 (78 aa)
MGESLTEQCRVEVEGEDEAKSSCPLCPGRHTCYNGRDKGSRSREGELTPKTRPQFGLQAATRLHEAGIASNRRSAIRR*

>peptide 3 (30 aa)
SGELQANNLKRMDTSFPWKERQFRIRFVYE*

>peptide 4 (30 aa)
MRPSHHAPYALGDTRATMGGTKGRDLARVS*

Sequence

>CNT30150229
AGTGGCGAACTCCAGGCTAATAATCTGAAGCGCATGGATACAAGTTTTCCTTGGAAGGAAAGACAATTCCGAATCCGCTTTGTCTACGAATAAGGAAGCT
ATAAGTAATGCAACTATGAATCTCATGGAGAGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCATGCTTAACACATGCAAGTCGAACGGGAAGTGGTGT
TTCCAGTGGCGAACGGGTGAGTAACGCGTAAGAACCTGCCCTTGGGAGGGGAACAACAACTGGAAACGGTTGCTAATACCCCGTAGGCTGAGGAGCAAAA
GGAGAAATCCGCCCAAGGAGGGGCTCGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGTCCGAGAGGATGATTA
GCCACACTGGGACTGAGACACGGCCCAGACTCCTACGAGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAG
GTGGAAGGAGAGGATGAGGCCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGGCGGGACAAAGGGTCGCGATCTCGCGAGGGTG
AGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTGCAGGCTGCAACTCGCCTGCATGAAGCAGGAATCGCTAGTAATCGCCGGTCAGCCATACGGCGGTG
AATCCGTTCCCGGGCCTTGTACACACCGCCCGTCACACTA