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Detailed information on CNT30150109


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521306Brachypodium distachyonSetaria italica25.1114.3984.48116forward

Expression of CNT30150109

Peptides detected in this lncRNA

>peptide 1 (74 aa)
LHARDPATVGDAAEASAGRAAADGEPGGGLEARNPLGADEILDLLQEGLHGERRQVGKGFELLDALNWPHLQLD*

>peptide 2 (55 aa)
CMLVILPPLETLPRPAPAERRLTGSPAVDLRQGTHLERMRYSICFKRDSTVRGGR*

>peptide 3 (53 aa)
MHLILPPLETLPRPALAERRPMGSPAVDLRPWKGATAVAADDITVGAIVHVRR*

Sequence

>CNT30150109
CCTGCATGCTCGTGATCCTGCCACCGTTGGAGACGCTGCCGAGGCCAGCGCCGGCAGAGCGGCGGCTGACGGGGAGCCCGGCGGTGGACTTGAGGCAAGG
AACCCACTTGGAGCGGATGAGATACTCGATCTGCTTCAAGAGGGACTCCACGGTGAGAGGCGGCAGGTAGGAAAGGGTTTCGAACTTCTTGATGCCCTCA
ATTGGCCACACCTACAATTAGATTAATAATTAGCACCGAAAGTATAATTTGAGACACATATCAGTATGATGACATACATACCTGCATGCACCTGATCCTT
CCACCGTTGGAGACGCTGCCGAGACCAGCGCTGGCTGAGCGGCGGCCGATGGGGAGCCCGGCGGTGGACTTGAGGCCCTGGAAAGGAGCAACGGCAGTAG
CCGCTGACGACATCACTGTGGGAGCCATCGTACACGTACGTAGATAGCTAACAAGAGGAGGC