Detailed information on CNT30149997


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30439866Brachypodium distachyonAegilops tauschii16.3521.5896.1552forward
CNT30667262Brachypodium distachyonTriticum dicoccoides56.69093.33180reverse complement
CNT30371086Brachypodium distachyonOryza glumipatula52.256.0891.57166reverse complement
CNT30577762Brachypodium distachyonOryza barthii58.4959.8189.25186reverse complement
CNT30604150Brachypodium distachyonOryza punctata58.4934.3290.86186reverse complement

Expression of CNT30149997

Peptides detected in this lncRNA

>peptide 1 (29 aa)
FFCYGYFHIFFLSNEPILSLLFYLSISIY*

>peptide 2 (30 aa)
MVSKVVSLFVFALYLIISISLRKTNEINRK*

Sequence

>CNT30149997
CTTTTTTTGCTATGGCTATTTCCATATCTTTTTTTTAAGTAATGAGCCTATCCTCTCTCTTCTATTTTATCTTTCTATTTCAATATACTGAAACCTATAT
AAGATTAGATAAATATTAAGAGGACTCTTCCGCCTAGATAAAAATCTATCATGGTCAGCAAAGTTGTTTCTTTATTTGTATTTGCACTTTACTTAATAAT
TTCAATTTCATTAAGAAAAACTAACGAAATAAATAGAAAATGAATCGAAGTCTTTTTTTTCTTCAAATCCAAAAAATTTCTCTTTTTTTATTTTATACAT
AGGTTGATACTTCATTTT