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Detailed information on CNT30149972


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618064Brachypodium distachyonSesamum indicum14.820.8689.6658forward
CNT30344011Brachypodium distachyonEragrostis tef26.286.7494.17103forward
CNT30115465Brachypodium distachyonOryza nivara25.519.7392100forward
CNT30592968Brachypodium distachyonEragrostis curvula26.2814.2793.2103forward

Expression of CNT30149972

Peptides detected in this lncRNA

>peptide 1 (29 aa)
ILLAHKDLCLLELDLENPDLDLKHPRYTD*

>peptide 2 (37 aa)
MFTRTRSGESGSRSQTSTVHRLKKKKEHLTTSITGCI*

Sequence

>CNT30149972
ATTTTACTAGCACATAAAGACCTATGTTTACTCGAACTAGATCTGGAGAATCCGGATCTCGATCTCAAACATCCACGGTACACAGATTAAAAAAAAAAAA
AGAACACCTGACAACAAGCATCACAGGATGTATCTAGGGACAGACAGATCCGCGTAAGGAGAAGAAACAGCGACAACACGACGCCACAAGGGTCGCCGGA
CCAGATCGGACCGGACCGGACGAGATCAGTCGTCGCGCTTCTTGAGCTTGTCGACGCGCTGCTGGAGTTGGTCGAGGCGGACGACTAGGGAGGTGCTCGG
AAGGGGTGCAGGCGTGCTCGTCGCCGCATGTGGGCCGGGTCTCGTACTTCCAGTAGATGTCCATGAGGAGGAAGAGGCAGAAGGGCACCACG