« Back to Brachypodium distachyon search


Detailed information on CNT30149849


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523464Brachypodium distachyonSetaria italica27.5415.383.5103forward

Expression of CNT30149849

Peptides detected in this lncRNA

>peptide 1 (28 aa)
MMVLEQVVERPFSGDRVLHRETQVRQHRQ

>peptide 2 (38 aa)
GTTKIIIVTRYYSTEPSASSVMYIPITSTPRSTMHPYT*

Sequence

>CNT30149849
GGCACAACAAAGATCATCATCGTCACAAGATACTACAGCACTGAACCATCAGCTTCCTCTGTAATGTACATACCAATCACATCCACTCCTCGATCCACCA
TGCATCCATACACATAGCATGCATAACACTAGCACGGAGTAGTACTTTACAACACAAATTAAGTGCATTGTCGACCATTTCAACTAGAGAGACATATCGT
CCCATCAATCAATTTTACATGCATGCATCAATCTGCCTCCAGCACCAGCAGGCACACGTCGACTTAATTAGCCGGAGAAGGTCTGGATGATGGTGCTGGA
ACAGGTTGTCGAGCGGCCCTTTTCCGGTGACCGCGTGCTGCACCGAGAAACCCAGGTACGCCAGCATCGCCAGC