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Detailed information on CNT30149719


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6EW69|PSAI_NYMAL, E-value = 1e-11

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690840Brachypodium distachyonOryza sativa66.233.2795.36151forward
CNT30678052Brachypodium distachyonSetaria viridis66.2311.6594.04151forward
CNT30616037Brachypodium distachyonSesamum indicum36.43.7591.5783forward
CNT3021444Brachypodium distachyonCitrullus lanatus24.5613.4391.0756forward
CNT30632299Brachypodium distachyonVigna unguiculata41.676.4888.4295forward
CNT3047368Brachypodium distachyonPrunus dulcis35.5310.9991.3681forward
CNT30539441Brachypodium distachyonBrassica napus40.791.988.1793forward
CNT30554212Brachypodium distachyonOryza glaberrima66.23495.36151forward
CNT30610498Brachypodium distachyonGossypium raimondii20.617.6393.6247reverse complement
CNT30354656Brachypodium distachyonLactuca sativa35.962.8790.2482forward
CNT30152456Brachypodium distachyonPrunus persica27.1912.8993.5562reverse complement
CNT3058960Brachypodium distachyonAmborella trichopoda49.125.586.61112forward
CNT30323690Brachypodium distachyonAsparagus officinalis50.884.5587.93116forward
CNT30726954Brachypodium distachyonLupinus angustifolius39.473.3987.7890forward

Expression of CNT30149719

Peptides detected in this lncRNA

>peptide 1 (46 aa)
VFHLCVERATYPTIFYYLHLLTLKNTRQSYFSAHKEIKNHCNCRKY*

Sequence

>CNT30149719
CGTTTTTCATTTGTGTGTAGAAAGAGCCACATACCCTACCATATTCTATTACTTACACTTACTTACACTAAAAAATACTAGACAATCTTATTTTTCTGCA
CATAAAGAAATAAAGAACCATTGCAATTGCCGGAAATACTAAGCCTACTAAAGGCACGAAAATCGAAGGTAAGTTTAAATCCGTCATAGAATAGGTGTCT
CAATTCAAATTAACTATTTCTATCTATC