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Detailed information on CNT30149714


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40004|RBS_HORVU, E-value = 1e-76

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30252486Brachypodium distachyonAvena sativa55.0661.3689.19370forward
CNT30136970Brachypodium distachyonLolium perenne54.1756.9688.46364forward

Expression of CNT30149714

Peptides detected in this lncRNA

>peptide 1 (47 aa)
LLQNILILICITGVYITCPSPNDSCSTLIIVVLMNTVNPGCWERSHA*

Sequence

>CNT30149714
TTCTTTTACAAAATATACTTATCTTAATATGTATAACCGGAGTTTATATTACATGCCCCTCTCCCAACGATAGTTGTAGTACTCTTATAATAGTAGTACT
CATGAATACAGTTAATCCGGGTTGTTGGGAGAGATCACATGCATAAATACAACATGAAACAAACGTGTGAAAAAGGTACATAAAATCGGTGTGACCCGTT
CTTGTATTATAAGAAATCAACTTGCTTAGGCCTTGCCGGACTCCTCACAACCCGGTGGCTTGAAGGCGATGAAGCTGATGCACTGCACTTGCCTGGTGTT
GTCGAAGCCGATGATGCGGACATAGGCGTCAGGGTACTCCTTCTTCACCTCCTCCAGCTCCTTTAGCACCTGCGTGGCGTCGGTGCACCCGAACATGGGA
AGCTTCCACATTGTCCAGTACCTGCCGTCGTAGTACCCGGGAGAGTTGCCGTGCTCACGGAAGACGAAACCGACCTTGCTGAACTCGAGGCAAGGAACCC
ACTTGGAGCGGATGAGATACTCGATCTGCTTCAAGAGGGACTCCACGGTGAGAGGCGGCAGGTAGGAAAGGGTTTCGAACTTCTTGATGCCCTGGAAAGG
AGCAACGGCAGTAGCCGCTGACGACATCACTGTGGGAGCCATCGTACACGTACGTAGATAGCTAACAAGAGG