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Detailed information on CNT30149632


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 1e-151

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30528694Brachypodium distachyonEucalyptus grandis68.6159.7188.15658forward
CNT30630785Brachypodium distachyonVigna unguiculata67.4775.8587.33647forward
CNT3044330Brachypodium distachyonPrunus dulcis65.3851.2788.2627forward
CNT30190365Brachypodium distachyonSecale cereale68.9362.0191.53661forward
CNT30143309Brachypodium distachyonLolium perenne68.5154.791.48657forward
CNT30228911Brachypodium distachyonAnanas comosus68.342.0787.18655forward
CNT30652285Brachypodium distachyonRosa chinensis66.8452.6787.52641forward
CNT30595768Brachypodium distachyonOryza meridionalis69.2448.2990.36664forward
CNT30370375Brachypodium distachyonOryza glumipatula69.3469.7187.67665forward
CNT30704859Brachypodium distachyonPrunus avium66.9453.187.54642forward
CNT30603673Brachypodium distachyonOryza punctata69.4567.3490.09666forward
CNT30174617Brachypodium distachyonVigna angularis65.959.0187.97632forward

Expression of CNT30149632

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MRRCWSGGMPSLSWILALTLSMVSDDSTSRVMVLPQLGTLGRRGEGDSSTSLEATGDEIWGSDLLVPF

>peptide 2 (44 aa)
MPSLSWILAFTLSMVSELSTSRVMVLPVRVLTKICIPPRRRRTR*

>peptide 3 (44 aa)
MPSLSWILAFTLSMVSDDSTSRVMVLPVKVFTKICIPPRRRRTR*

Sequence

>CNT30149632
TGATGCAAATAAGCAGACAGATTATAATGCCAAACTTCACTTATGCTTTCTCATAGTACTTAAAACCATACTGCTATAGCAGTAACTGTTTGCACGAAAC
CAACAGACACTGGGGGGACTCGATGGTCCATCAACCAGACACAGGTAGACTTAACACGAACTGAGACAGATACTTCAGAGGGCAAGAGCAGACCATTACT
GACCACCTCGAAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCCAGCTGCTTTCCTGCAAAGAT
CAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCAATGGTGTCAGATGACTCCACCTCAAGGGTGATGGTCTTG
CCAGTCAAAGTCTTCACAAAGATCTGCATACCACCACGCAGACGCAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGAC
CATCCTCCAGCTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGA
GCTCTCCACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATACCACCACGCAGACGCAGGACAAGGTGAAGGGTGGACTCCTTC
TGAATGTTGTAGTCAGCGAGGGTGCGACCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTATCCTGGATCT
TGGCCTTAACGTTGTCGATGGTGTCAGACGACTCAACCTCAAGGGTGATGGTCTTGCCACAGCTCGGTACCTTGGGGAGGCGGGGGGAAGGAGATTCTTC
GACGAGCCTCGAGGCGACCGGAGACGAGATTTGGGGATCGGATTTGTTGGTTCCGTTCC