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Detailed information on CNT30149608


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 9e-59

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30406993Brachypodium distachyonBeta vulgaris8.1424.2993.6294reverse complement
CNT30562726Brachypodium distachyonActinidia chinensis12.0335.0190.65139forward
CNT30581628Brachypodium distachyonEchinochloa crusgalli20.3568.7198.3235forward

Expression of CNT30149608

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MGESLTEQCRVEVEGLRVVNFFSRRRNNDGI*

>peptide 2 (36 aa)
MISRWSERMISHTGTETRPRLLREAAVGNFPQWAKA*

>peptide 3 (44 aa)
IQVFLGRKDNSESALSTNKEAISNATMNLMESLILAQDERWRHA*

Sequence

>CNT30149608
ATACAAGTTTTCCTTGGAAGGAAAGACAATTCCGAATCCGCTTTGTCTACGAATAAGGAAGCTATAAGTAATGCAACTATGAATCTCATGGAGAGTTTGA
TCCTGGCTCAGGATGAACGCTGGCGGCATGCTTAACACATGCAAGTCGAACGGGAAGTGGTGTTTCCAGTGGCGAACGGGTGAGTAACGCGTAAGAACCT
GCCCTTGGGAGGGGAACAACAACTGGAAACGGTTGCTAATACCCCGTAGGCTGAGGAGCAAAAGGAGAAATCCGCCCAAGGAGGGGCTCGCGTCTGATTA
GCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGATGGTCCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACG
GGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTGGAAGGCCTACGGGTCGTCAACTTCTTTTCTCGGA
GAAGAAACAATGACGGTATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCGGAATGATTGGGC
GTAAAGCGTCTGTAGACTAGCGATTGCTTCTCCACGAGGCTCATACCAGGCGCTACGGCACTGAAGTATGTAACCGATGCCATACTCCCAGGAAAAGCTC
GAACGACCTTCAACAAAAGGGTACCTGTACCCGAAACCGACACAGGTGGGTAGGTAGAGAATACCTAGGGCGCGAGACAACTCTCTCTAAGGAACTCGGC
AAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCCCCTCACAAAAGGGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGC
AAAGTCGTAAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAAGGAAGTTGGTGAACTGATGACAGGGAAGTTGGCGACCGAAGCCCCG
GTGAACGGCGGTCGTAACTATAGCGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCCGCACGAAAGGCGTAACGATCTGGGCACTGTCTC
GGAGAGAGGCTCGGTGAAATAGACATGTCTGTGAAGATGCGGACTACCTGCACCT