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Detailed information on CNT30149310


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690198Brachypodium distachyonOryza sativa66.7611.0282.85239forward
CNT30222581Brachypodium distachyonHordeum vulgare37.4355.8389.55134forward
CNT30552096Brachypodium distachyonOryza glaberrima29.6118.2187.74106forward
CNT30580303Brachypodium distachyonEchinochloa crusgalli66.7651.0785.77239forward
CNT30115738Brachypodium distachyonOryza nivara41.6221.4783.89149forward

Expression of CNT30149310

Peptides detected in this lncRNA

>peptide 1 (31 aa)
LACQSYKHRTCWIFSQSYENIVLGQCSPLFL*

Sequence

>CNT30149310
CACTAGCATGCCAAAGCTATAAACATCGGACTTGTTGGATATTCTCCCAAAGTTACGAGAATATAGTTCTGGGGCAATGTAGCCCATTGTTCCTCTAGCT
GCAGTCAGTGTGACGATGCTGTGTTCCCTTGCACACAGCTTTGCAAGGCCAAAGTCTGAAATCTTTGGATTGAAGCTGCAGTCAAGCAAGATGTTGTGAG
GTTTGATGTCGAAGTGGAGGATGCGCTGATTGCCCCCTTGATGCAGAATGCTTGCCTCCGTTGTGAGCTGAATCCACAGTGATGCCCTTTTTGCTCGCAT
TCTATACAAATGTTGGCAATGTCAGGAATCGACCAACTCAACGTTGCCTCAGCAGATG