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Detailed information on CNT30149306


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30134638Brachypodium distachyonLolium perenne20.26.4286.4281forward

Expression of CNT30149306

Peptides detected in this lncRNA

>peptide 1 (38 aa)
VRSACAGSGCRGVGGDWLPRLRRLSRGRVARRWRVSRG*

>peptide 2 (77 aa)
MTHLPSQLVGSPREAGKPRLPHQLSPPVGRRMEEGRRRPWLLAGTLSEAGRRPPAGTLIEAARTRPDQRHQHRRRPG*

Sequence

>CNT30149306
GTAAGGAGCGCCTGTGCTGGGTCCGGCTGCCGCGGGGTAGGCGGTGACTGGCTCCCCCGCCTTCGCCGGCTTTCCCGCGGGCGGGTAGCCCGACGGTGGA
GGGTAAGCCGTGGATGACTCACCTGCCTTCCCAGCTGGTGGGTAGCCCGAGGGAGGCGGGTAAGCCGCGGCTGCCCCATCAGCTTTCGCCGCCGGTGGGT
AGGCGGATGGAGGAGGGTAGGCGTCGGCCTTGGCTGCTGGCGGGTACCCTGAGTGAGGCGGGTAGGCGGCCGCCGGCGGGTACGCTGATTGAGGCTGCGC
GTACCCGGCCTGACCAGCGCCACCAGCATAGGCGGCGGCCTGGGTGACCTCGCCGAGCTTGTACGAAAAATTCAACACACCCTGGGGCTTGCCGGATCCC
A