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Detailed information on CNT30149122


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30193719Brachypodium distachyonSecale cereale18.8128.4487.3795forward
CNT30293847Brachypodium distachyonTriticum aestivum18.8127.5489.4795forward
CNT30222985Brachypodium distachyonHordeum vulgare18.8120.387.3795forward
CNT30389305Brachypodium distachyonTriticum turgidum19.212188.6697forward
CNT30438687Brachypodium distachyonAegilops tauschii18.8127.789.4795forward
CNT30683064Brachypodium distachyonTriticum urartu18.8120.2687.3795forward

Expression of CNT30149122

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MGGYKHGMGWHACTRTKGNKGLACAASLGSVHGSGRSSSYM*

>peptide 2 (95 aa)
MVAVDRVAICRWSLHASLACKLSCCSRLRSSSCSMSSRSWCRTCRMTRSCSFLRSKTSSVECSNLLRKKIKLKASRLVCASCWLEEQWQGSQGYL*

Sequence

>CNT30149122
GCTAGTAATAGTTAAGACGATGATCACAGAGATAACACACACGTACGTGCATGTATAGTTAAACCAGGGCGATTTTATTTATGGGGGGTTACAAGCATGG
CATGGGATGGCATGCATGCACCCGTACAAAGGGAAATAAGGGCCTAGCTTGTGCAGCTAGCCTTGGATCGGTTCATGGTAGCGGTAGATCGAGTAGCTAT
ATGTAGATGGTCGTTGCATGCGTCCCTGGCATGCAAATTAAGCTGCTGCAGCAGATTGAGATCTAGCAGCTGCAGCATGAGCAGCCGCAGCTGGTGCCGC
ACTTGCAGGATGACCCGCAGTTGCAGTTTCCTCCGCAGCAAGACATCTTCGGTCGAGTGCTCGAACTTGCTTAGGAAGAAGATTAAGCTGAAGGCTTCTA
GGCTTGTGTGTGCTTCTTGCTGGCTTGAGGAACAATGGCAAGGCAGCCAGGGCTATTTATAGCCAATCGATCAGGAAGAAGAAGAAGAAGAAGGAGAAGG
CTGAG