Detailed information on CNT30149097


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FID6|Y5392_ARATH, E-value = 3e-22

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690663Brachypodium distachyonOryza sativa10021.6885.82268forward
CNT30629487Brachypodium distachyonVigna unguiculata20.910.287.556forward
CNT30389603Brachypodium distachyonTriticum turgidum80.2262.1490.23215forward
CNT3084079Brachypodium distachyonVigna radiata20.96.8191.0756forward

Expression of CNT30149097

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MLVIHHLDQSGHKSSPENIFHWIFEQLISHFSFLQSSLTASFHNCRHLTLLKPLQRFASELLEQ*

Sequence

>CNT30149097
GTCATCTTTCTGGCGATTTCCTCAATTTCACTTGTGACTTCACATGCTTGTAATCCATCATCTTGATCAAAGTGGTCATAAATCCAGTCCGGAAAATATT
TTTCACTGGATTTTTGAACAATTGATTTCACATTTTTCCTTCCTCCAATCATCTCTAACAGCATCATTCCATAACTGTAGACATCTGACTTTGTTGAAAC
CCCTCCAAAGGTTCGCGAGTGAACTTCTGGAGCAATGAATCCAACTGTTCCTCTAGCACCAGTCATTG