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Detailed information on CNT30148970


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30461084Brachypodium distachyonSaccharum spontaneum11.7320.2992.7569forward

Expression of CNT30148970

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MVFGENRCNQQQNILHGIGSTSLNLPTVLASPYSNCFPLHSKL*

Sequence

>CNT30148970
ATGAGACACCAGGTAAATGATGTAGCCACATACTTTCAGGAACCAACAAATCGATAAACATCATAACAGGTTCTCCATTTAGGTAAATAGCATTTCACGA
GTCTTGACTGGACTACAAAATTCAACTACTGCTTTTTTCAAATTGACCACAATCAAGCTTCAGCCTACTCCCTCAGGCGACGGATCGTGCTTCTGACAGT
GACTGCACTAGCAGTGCTGGTAGTGCCAAAAAACAAAATGAGCAAACATAAGAGACAAGAATGACATGGTATTTGGAGAAAATAGATGTAATCAGCAGCA
GAACATACTTCATGGTATAGGCTCCACCAGCCTTAACCTTCCCACAGTCCTTGCATCCCCATATTCCAACTGCTTTCCGCTTCACAGCAAACTGTGATTC
GAGAATACATCAGAAACAAAGAAAGAATACACAACAAATAATATAAGGATAACAAAAAAGAATGATCTCAAATTACAAAGAATTGTCATACATTTTATAA
AGTGAGGATAAGATGTTACGGCTATTAACCTGTCTAAATGTAAACAATATTATCATTATCTCTGCATGGCTAGAATGATGTAAAGCAG