Detailed information on CNT30148622


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695037Brachypodium distachyonOryza sativa83.6126.6387.25204forward
CNT30520523Brachypodium distachyonSetaria italica87.78.9790.65214forward
CNT30640394Brachypodium distachyonNymphaea colorata2512.286.8961forward
CNT30159576Brachypodium distachyonPistacia vera27.878.5989.7168forward
CNT30180948Brachypodium distachyonSecale cereale84.4310.0593.2206forward
CNT30297885Brachypodium distachyonTriticum aestivum46.3118.1191.15113forward
CNT30385683Brachypodium distachyonTriticum turgidum53.6959.0190.08131forward
CNT3084566Brachypodium distachyonVigna radiata41.817.3292.16102forward
CNT30552571Brachypodium distachyonOryza glaberrima25.8224.992.0663forward
CNT30254684Brachypodium distachyonAvena sativa20.0821.7889.849forward
CNT30461535Brachypodium distachyonSaccharum spontaneum20.089.7691.8449forward
CNT3012516Brachypodium distachyonZea mays83.6114.791.18204forward
CNT30227632Brachypodium distachyonAnanas comosus21.727.8694.3453forward
CNT30129030Brachypodium distachyonCorymbia citriodora26.6411.0292.3165forward
CNT30681057Brachypodium distachyonTriticum urartu88.9321.387.56217forward
CNT30346584Brachypodium distachyonEragrostis tef84.0225.5387.8205forward
CNT30355349Brachypodium distachyonLactuca sativa26.6410.8387.6965forward
CNT30331328Brachypodium distachyonDioscorea rotundata27.4613.0691.0467forward
CNT30102464Brachypodium distachyonOryza rufipogon87.38.3889.2213forward
CNT30495761Brachypodium distachyonDigitaria exilis20.0812.591.8449forward
CNT30116510Brachypodium distachyonOryza nivara46.3114.6990.27113forward

Expression of CNT30148622

Peptides detected in this lncRNA

>peptide 1 (79 aa)
EDGVDEHEVGALERLDEPDAAHGAEALRDHVEQGPDQGDFPGQEEPEGDGRVDVSPRDARGAVDEHEDHAAEGPRDAENP

Sequence

>CNT30148622
GAGAAGACGGTGTAGACGAGCACGAAGTAGGCGCTCTGGAACGCCTTGACGAGCCCGACGCCGCACATGGCGCCGAGGCACTGCGCGATCATGTAGAGCA
GGGCCCGGACCAGGGAGACTTTCCGGGCCAGGAAGAGCCCGAAGGTGACGGCCGGGTTGATGTGTCCCCCAGAGATGCCCGCGGTGCAGTAGACGAGCAC
GAAGATCATGCCGCCGAAGGCCCACGCGATGCCGAGAATCCCCA