Detailed information on CNT30148461


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730619Brachypodium distachyonCorchorus capsularis58.357.3290.51137reverse complement
CNT30511593Brachypodium distachyonSolanum lycopersicum58.321.0488.32137reverse complement
CNT30115272Brachypodium distachyonEutrema salsugineum58.328.1988.32137reverse complement

Expression of CNT30148461

Peptides detected in this lncRNA

>peptide 1 (36 aa)
IQEMEGQSFFWFFHLFIKELNNEDRWQVPDRFDQAV*

>peptide 2 (37 aa)
MKIDGKCLIDLIRPCRNKVQIVRSLGCLSCIHHCTST*

Sequence

>CNT30148461
CTATCCAAGAGATGGAAGGGCAGAGCTTTTTTTGGTTTTTTCATCTTTTCATCAAAGAGTTGAACAATGAAGATAGATGGCAAGTGCCTGATCGATTTGA
TCAGGCCGTGTAGGAACAAGGTTCAAATCGTTCGTTCGTTAGGATGCCTCAGCTGCATACATCACTGCACTTCCACTTGACACCTATTTAAACGGCTCGT
CTCGCTGCTACCTTATCCTATTTCCATACTTTTGT