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Detailed information on CNT30148335


BLAST search results

BLAST vs Swiss-Prot:
sp|P81651|NLTP1_PRUAR, E-value = 9e-14

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30664182Brachypodium distachyonTriticum dicoccoides14.6620.2996.4356forward
CNT30721578Brachypodium distachyonTriticum spelta20.4225.7491.0378forward

Expression of CNT30148335

Peptides detected in this lncRNA

>peptide 1 (82 aa)
MGMQAAATQTCSSKTNYYQAATTKTTHNNEVGPDAAHAARLLLEAGARRLAVGGAGRGAVEPAHAGAAAGARAGGAARGVADA

>peptide 2 (38 aa)
LKKIFLDIIKRPCILMEYSMHYNTRSPHNNEWYSESKK*

>peptide 3 (46 aa)
MPPMPLVCCLRQVHAVLRSAGLDAALLSPRTPEQQRALGLAAPPVA*

Sequence

>CNT30148335
TTTTGAAGAAAATATTCTTGGACATTATTAAGAGACCATGCATATTAATGGAATACAGCATGCATTACAATACAAGGTCCCCTCACAACAACGAGTGGTA
CAGCGAAAGTAAAAAATAAAACTCAAGCTCTCATGGGCATGCAAGCAGCAGCAACACAAACCTGCAGCAGTAAAACTAATTATTACCAAGCAGCAACAAC
TAAAACAACACACAACAACGAGGTCGGGCCTGATGCCGCCCATGCCGCTCGTCTGCTGCTTGAGGCAGGTGCACGCCGTCTTGCGGTCGGCGGGGCTGGA
CGCGGCGCTGTTGAGCCCGCGCACGCCGGAGCAGCAGCGGGCGCTCGGGCTGGCGGCGCCGCCCGTGGCGTAGCCGATGCAG