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Detailed information on CNT30148202


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695553Brachypodium distachyonOryza sativa41.8341.0890.35228forward
CNT30517240Brachypodium distachyonJuglans regia17.6131.7982.2996forward
CNT30630888Brachypodium distachyonVigna unguiculata32.4826.1479.66177forward
CNT30710396Brachypodium distachyonGlycine max39.6344.1779.17216forward
CNT30228866Brachypodium distachyonAnanas comosus26.2416.3687.41143forward
CNT30362113Brachypodium distachyonSorghum bicolor22.0218.1390120forward
CNT30370885Brachypodium distachyonOryza glumipatula41.8332.8590.35228forward
CNT30570681Brachypodium distachyonVitis vinifera31.7412.6680.92173forward
CNT30499040Brachypodium distachyonDigitaria exilis35.7828.6889.74195forward
CNT30174623Brachypodium distachyonVigna angularis32.4820.7779.66177forward
CNT30558912Brachypodium distachyonPanicum hallii11.0123.3591.6760forward
CNT30724196Brachypodium distachyonLupinus angustifolius20.1813.2282.73110forward

Expression of CNT30148202

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MLLKFCPTPCLPAFTFSGYTPSLGWRYCTSPLGKTR*

>peptide 2 (41 aa)
ETLKLQVVHRSIIIIPAPHQLLRTDELINTRMHANIRCLIN*

>peptide 3 (48 aa)
MGLRGRAGAGRSRRGLGWRREPPGFLGRRRGGRLGRGRWGKGRRGSGVW

Sequence

>CNT30148202
TTGAAACTTTAAAATTACAAGTAGTCCATCGATCGATCATCATCATCCCCGCACCCCATCAACTGCTACGTACGGATGAACTAATTAACACACGCATGCA
TGCAAATATACGATGCTTAATTAATTAACACCGATCGATCAGACGTCGAAGGTGTTCTTGCCGGTGAACTTGACCTCAATCGGGCTAACATTCTTCCCGA
TGCTCCTGAAATTCTGCCCGACGCCCTGCCTGCCGGCGTTCACCTTCTCCGGGTACACCCCGTCCTTGGGGTGGAGGTACTGCACCTCGCCGCTGGGGAA
GACGCGGTAGAACTGGTAGGCGATCTTGTACTTGGAGCGGAGCCGGTTGCCGAGCGCCAGGCACTGCTCCTTGCGCGCCAGCTTGAGGAGATTGGGGATG
GGGTTGAGGGGTCGAGCTGGGGCGGGACGAAGCCGGCGGGGGCTGGGGTGGCGACGGGAGCCGCCGGGGTTTCTGGGGCGGCGGCGTGGAGGGCGGTTGG
GGCGCGGGAGGTGGGGGAAGGGAAGGCGAGGGAGCGGGGTTTGGG