Detailed information on CNT30148159


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30381505Brachypodium distachyonManihot esculenta55.9653.2694.19155reverse complement
CNT30487788Brachypodium distachyonOlea europaea27.085.4690.6775forward

Expression of CNT30148159

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MDRSPRFGSISSDNRPMKTRFRYGSGGFRSRDEAWEKL

>peptide 2 (55 aa)
VMSSQLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLCLVSSKLHPGHG*

Sequence

>CNT30148159
CGTGATGTCCAGTCAACTGCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCT
GATTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGTTTCATCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTGAC
AATCGCCCTATGAAGACTCGCTTTCGCTACGGCTCCGGTGGGTTCCGATCGAGGGATGAAGCTTGGGAGAAGCTGAG