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Detailed information on CNT30148151


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30390355Brachypodium distachyonTriticum turgidum23.547.4197.87329forward
CNT30234565Brachypodium distachyonBrassica oleracea14.9332.7189.95209forward
CNT30607747Brachypodium distachyonGossypium raimondii11.9341.8591.02167forward
CNT30688894Brachypodium distachyonTriticum urartu23.539.2197.87329forward
CNT30120788Brachypodium distachyonCitrus clementina6.4342.459090reverse complement

Expression of CNT30148151

Peptides detected in this lncRNA

>peptide 1 (87 aa)
MPPKPKTAEEIRSFSSLGILPRAIVIVILLFNYFNHFRAPRITSKAYDSLIICGRFLSRAMPFFNGLEDINFFIFIYGVTTEVVVNP*

>peptide 2 (48 aa)
MKKSNPSFPICSLLHGWKNKNGGFLKKKDFRNQFLCVVERSCDLFLFL*

>peptide 3 (43 aa)
MLIFNSPKHFVACYALPRLWVPRYPPQAFPLLNLAINVKAMPS*

>peptide 4 (39 aa)
MNTQNCSHFISIFPYITKEWKRFLKSLGSQKRVINATEA*

>peptide 5 (34 aa)
NTQMKPNHTCPPIISSKSSTLTIQPSPPKGDFSK*

>peptide 6 (32 aa)
MEKIPQESRVPEARDKCHRSLRLRRKLDPFLL*

Sequence

>CNT30148151
AATACACAAATGAAACCCAACCATACATGTCCACCAATTATATCTTCTAAATCATCCACACTAACAATCCAGCCTTCTCCCCCAAAAGGGGATTTTAGTA
AATAACCAAATATAACACCGGGGCTAAGGGTATCATATACACCGCCAAAATAAAGAGCCTTGAGTACTAGAAGAAAAGCACCTAGACCTAACAAAATTAA
ATGAATACCCAAAATTGTAGTCATTTTATTTCTATCTTTCCATACATAACCAAAGAATGGAAAAGATTCCTCAAGAGTCTCGGGTCCCAGAAGCGCGTGA
TAAATGCCACCGAAGCCTAAGACTGCGGAGGAAATTAGATCCTTTTCTTCTTTAGGAATTCTACCAAGGGCTATAGTCATAGTGATCCTCCTATTCAATT
ACTTCAACCATTTCCGAGCACCTCGTATCACTTCCAAGGCATATGATAGTTTGATTATCTGTGGACGATTTCTTTCTCGTGCAATGCCGTTTTTCAATGG
TCTCGAAGATATAAATTTTTTCATTTTTATCTATGGAGTCACAACCGAGGTCGTGGTAAATCCATAAATTGGATTCGATTTTTTTCTTATACTTTTTTCT
TATACTTCTTATACTAAAGAACTAAACATTTGAATTCACCATTATTCCATGACTCCGGTTTCAAAGCCTATCTTTTAAGGGAAAAATGAAAAAAAGTAAC
CCCTCTTTTCCCATTTGCTCTCTATTGCATGGGTGGAAGAACAAAAATGGAGGATTCTTAAAAAAAAAAGACTTTCGAAATCAATTTTTATGTGTAGTGG
AAAGGAGTTGCGATTTATTCTTATTCCTATAGAGTATCTAGTAACAAGAATATAAAATCGTAAATAGCGAAAAATTATTATCTTGCAGGGTCTAAGTCTA
AGAAAATAAAAAAAATTCGTTTATACAATTTCATCTATATCGAATTTATATATCAGAATAGCGGATAGAGGCATAATTCAAGGAGTCAGGTCTACTTACT
TTATCCTTGTTTCCTATTTTATTGTGGGTTTGATAAGAACCCTTTTTGCTTTCTTGATAAATTTCGTAGATGTAAAGGGCAGTTTAAAAGGTTGACCTAT
TTGGGAATCTCCGGATCTATGCTTATTTTCAACTCCCCGAAGCATTTCGTCGCTTGCTACGCCCTTCCTCGTCTCTGGGTGCCTAGGTATCCACCGCAAG
CCTTTCCTCTTTTGAACCTCGCCATTAACGTTAAGGCTATGCCATCCTAAGGTGCTACTAAATGGAAGGATCTTATCAACGTCCATGAATGCGAAATCAT
AGATCGAACTGCCGAATTGGCAAAATTCGGTGCTATCATAGTATCCGCTAAGTTCACGGGCTGGAGATAAGCGGACTCGAACCGCTGACATCCGCCACAG