Detailed information on CNT30148125


BLAST search results

BLAST vs Swiss-Prot:
sp|P04165|CYB_MAIZE, E-value = 7e-42

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30548225Brachypodium distachyonIpomoea triloba29.036.5792.5981forward
CNT30378677Brachypodium distachyonArabidopsis thaliana63.86.591.57178forward
CNT30390425Brachypodium distachyonTriticum turgidum60.2217.7896.43168forward
CNT30592530Brachypodium distachyonMusa acuminata39.7813.2595.5111forward
CNT30443845Brachypodium distachyonAegilops tauschii48.7528.0498.53136forward
CNT30309525Brachypodium distachyonCamelina sativa67.3845.5291.49188forward
CNT3081844Brachypodium distachyonBrassica juncea43.0117.1795.83120forward
CNT30229709Brachypodium distachyonAnanas comosus60.2235.2995.83168forward
CNT30689753Brachypodium distachyonTriticum urartu96.4227.9697.77269forward

Expression of CNT30148125

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MPQNIRSKKNPNGRKDSRSYPTYKILYIKIRVRSNFIHLRIERI

>peptide 2 (34 aa)
RDIKTGAIAVAPPALSGILRRMAWIGRKYHSGTI*

Sequence

>CNT30148125
GAGAGATATAAAAACTGGTGCTATTGCGGTTGCACCTCCCGCTTTGTCAGGTATACTGCGAAGAATGGCATGGATCGGTAGGAAATACCATTCCGGCACA
ATATGAGGCGGGGTGGGCATCGGATTAGCAGGTATAATTGTCGGGATGCCCCAAAACATTAGGAGCAAAAAAAATCCAAATGGAAGAAAAGATAGCAGAA
GTTACCCGACCTACAAGATCCTTTACATAAAAATAAGGGTAAGAAGCAATTTTATCCATCTCAGAATAGAAAGGATCTT