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Detailed information on CNT30148090


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696475Brachypodium distachyonOryza sativa39.3544.6599.391143reverse complement
CNT30676938Brachypodium distachyonSetaria viridis17.0751.6194.56496reverse complement
CNT30524664Brachypodium distachyonSetaria italica31.9167.7198.49927reverse complement
CNT30639555Brachypodium distachyonNymphaea colorata45.6877.6995.331327reverse complement
CNT30536068Brachypodium distachyonEucalyptus grandis49.0941.4193.061426forward
CNT30513456Brachypodium distachyonJuglans regia49.1644.9994.121428reverse complement
CNT30500477Brachypodium distachyonCoffea canephora49.0978.3194.61426reverse complement
CNT30269781Brachypodium distachyonChenopodium quinoa49.0248.1993.051424reverse complement
CNT30730500Brachypodium distachyonCorchorus capsularis39.7297.2294.81154reverse complement
CNT30630109Brachypodium distachyonVigna unguiculata49.545.6293.531438reverse complement
CNT30196858Brachypodium distachyonPisum sativum47.9975.0792.541394reverse complement
CNT30503431Brachypodium distachyonNicotiana attenuata34.4972.5695.611002forward
CNT3044711Brachypodium distachyonPrunus dulcis16.73101.8994.24486forward
CNT3090649Brachypodium distachyonSolanum tuberosum49.0552.1295.021425reverse complement
CNT30186247Brachypodium distachyonSecale cereale43.7989.4599.451272reverse complement
CNT30291213Brachypodium distachyonTriticum aestivum52.643.9899.481528reverse complement
CNT30225309Brachypodium distachyonHordeum vulgare34.883.995.151011reverse complement
CNT30400299Brachypodium distachyonTriticum turgidum39.3553.5999.391143reverse complement
CNT30569398Brachypodium distachyonActinidia chinensis22.8633.9892.32664reverse complement
CNT30588765Brachypodium distachyonMusa acuminata20.986.9695.55607forward
CNT30248027Brachypodium distachyonAvena sativa33.4699.7997.63972forward
CNT30668159Brachypodium distachyonTriticum dicoccoides21.4887.3995.99624reverse complement
CNT30310298Brachypodium distachyonCamelina sativa35.1867.0295.51022forward
CNT3062651Brachypodium distachyonArabidopsis lyrata23.7282.8196.08689forward
CNT30460907Brachypodium distachyonSaccharum spontaneum52.645.8699.541528reverse complement
CNT30136065Brachypodium distachyonLolium perenne22.2100.4798.29645reverse complement
CNT3018333Brachypodium distachyonZea mays52.653.5299.541528reverse complement
CNT30655263Brachypodium distachyonRosa chinensis47.8176.9591.941389reverse complement
CNT30206724Brachypodium distachyonHelianthus annuus47.3763.4195.711376reverse complement
CNT30713553Brachypodium distachyonMalus domestica golden17.977.1593.85520reverse complement
CNT30689042Brachypodium distachyonTriticum urartu52.653.0299.151528reverse complement
CNT30720907Brachypodium distachyonTriticum spelta35.1510099.411021forward
CNT30347837Brachypodium distachyonEragrostis tef22.0783.1498.91641forward
CNT30363261Brachypodium distachyonSorghum bicolor14.833.7899.07430reverse complement
CNT30620564Brachypodium distachyonCajanus cajan25.6814.4292.23746forward
CNT30596725Brachypodium distachyonOryza meridionalis52.6344.3199.611529reverse complement
CNT30154922Brachypodium distachyonPrunus persica49.0284.3191.571424forward
CNT30411768Brachypodium distachyonPapaver somniferum48.7848.3394.51417forward
CNT30646402Brachypodium distachyonCannabis sativa37.886.889.81098forward
CNT30319706Brachypodium distachyonAsparagus officinalis49.0249.5596.071424reverse complement
CNT3036965Brachypodium distachyonCucumis melo24.5898.0892.44714reverse complement
CNT30332807Brachypodium distachyonDioscorea rotundata48.585.2996.11409forward
CNT30103033Brachypodium distachyonOryza rufipogon49.2692.2697.91431forward
CNT30576679Brachypodium distachyonOryza barthii12.770.2997.83369reverse complement
CNT30585638Brachypodium distachyonEchinochloa crusgalli24.9946.999.45726forward
CNT30604015Brachypodium distachyonOryza punctata17.35104.3595.63504forward

Expression of CNT30148090

Peptides detected in this lncRNA

>peptide 1 (30 aa)
QSFFWFFHLFIKELNNEDRWQVPDRFDQAV*

>peptide 2 (46 aa)
MFQFASSYSVTGGVYKARERIHRRMADRRLLAIPASCRRVAACNPN*

>peptide 3 (49 aa)
MPPAFILSQDRTLHEIHSCITYSFLIRRQSGFGIVFPSKENLYPCASDY*

>peptide 4 (54 aa)
MSSQLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLCLVSSKLHPGHG*

>peptide 5 (55 aa)
MSRRLILQQARGQRSLSPPTAWELSTVSRSISLPTGGSFHLSLTVLLRYRSPRSI*

>peptide 6 (34 aa)
MFSLLKPTFSLPLRRPPLSRLLPSKAERSPTDAF*

>peptide 7 (35 aa)
MRFIVALLIASLFVDKADSELSFLPRKTCIHALQII

>peptide 8 (37 aa)
MKIDGKCLIDLIRPCRNKVQIVRSLGCLSCIHHCTST*

>peptide 9 (43 aa)
MHHLCPRSYALLTRSPLETPLPVRLACVKHAASVHPEPGSNSP*

>peptide 10 (71 aa)
MSVVRAFPGSMASVTYFSAVAPGMSLVEKQSLVHGAHTSALQRLVLGPRLEAFSLPLLTLKKQGHLVSLNL*

>peptide 11 (66 aa)
MGGEPVAVSAVIPEALGKSEERALILGWAYYLYAFSSYPLRTWLPSVYRRHDNWYTRGASFPVLSY*

>peptide 12 (58 aa)
MDRTVSRRSEPSSRTALMGEQPNPWNHLQLQVAKSRHRGAKPSRRCGLLGKISLLSLE*

>peptide 13 (56 aa)
MLSAVILSALGYPAFTVGTITGTPEVRPSRSSRTRERSSQCSNAHTGYGPNCLTTF*

Sequence

>CNT30148090
GGCAGAGCTTTTTTTGGTTTTTTCATCTTTTCATCAAAGAGTTGAACAATGAAGATAGATGGCAAGTGCCTGATCGATTTGATCAGGCCGTGTAGGAACA
AGGTTCAAATCGTTCGTTCGTTAGGATGCCTCAGCTGCATACATCACTGCACTTCCACTTGACACCTATTTAAACGGCTCGTCTCGCCGCTACCTTATCC
TATTTCCATACTTCTGTCGCTCCATCCCCGTATGGGTGGAGAACCCGTCGCTGTCTCGGCTGTGATACCGGAGGCTCTAGGGAAGTCGGAGGAGAGAGCA
CTCATCTTGGGGTGGGCTTACTACTTATATGCTTTCAGCAGTTATCCTCTCCGCACTTGGCTACCCAGCGTTTACCGTAGGCACGATAACTGGTACACCA
GAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAA
CCCAGCTCACGTACCGCATTAATGGGCGAACAGCCCAACCCTTGGAACCACCTACAGCTCCAGGTGGCGAAGAGCCGACATCGAGGTGCCAAACCTTCCC
GTCGATGTGGACTCTTGGGGAAGATCAGCCTGTTATCCCTAGAGTAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGG
CCGACTTTCGTCTCTGCTCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGACCAATGTCCGTCGTTCGAGCTTTTCCTGGGAG
TATGGCATCGGTTACATACTTCAGTGCCGTAGCGCCTGGTATGAGCCTCGTGGAGAAGCAATCGCTAGTCCACGGGGCTCATACTTCAGCGCTGCAGCGC
TTGGTACTCGGACCTCGGCTCGAGGCATTTTCTCTACCCCTTCTTACCCTGAAAAAGCAGGGTCACCTTGTGTCCTTAAACCTATAACCATCTTTCGGCT
AACCTAGCCTCCTCCGTCCCTCCGTACCAACAAGGGGTAGTACAGGAATATTGACCTGTTGTCCATCGACTACGCCTTTCGGCCTGATCTTAGGCCCTGA
CTCACCCTCCGTGGACGAACCTTGCGGAGGAAACCTTGGGTTTTCGGGGCATTGGATTCTCACCAATGTTTTCGTTACTCAAGCCGACATTCTCGCTTCC
GCTTCGTCGACCCCCGCTTTCGCGGTTGCTTCCCTCTAAGGCGGAACGCTCCCCTACCGATGCATTTTGACATCCCACAGCTTCGGCAGATCGCTTAGCC
CCGTTCATCTTCAGCGCAAGGGCGCTCGATCAGTGAGCTATTACGCACTCTTTAAAGGGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTTTGCACCCC
CACCTCCTTTATCACTGAGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCGACGATGAAGCTTATCCCCCATCGTCTCACTGGCC
GACCTTGACCCCTGTTATTTTGGGGTCATATCTAGTATTCAGAGTTTGCCTCGATTTGGTACCGCTCGCGCAGCCCGCACCGAAACAGTGCTTTACCCCT
AGATGTCCAGTCAACTGCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGA
TTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGTTTCATCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTGACAA
TCGCCCTATGTAGACTCGCTTTCGCTACGGCTCCGGTGGGTTCCGTTCCCTTAACCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACG
CGGTCAGAGATCACTTTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTATTTCACTACCCACTGGGGGTTCTTTTCACCTTTCCCTCACG
GTACTACTTCGCTATCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCGGGTCAGA
GCGTAAGCTAGTGATGCTTTCGGCTACTGGACTTTAGCCATCTAGGGTGCGGCACTCAACCGCTTCGCCTAGCAGCACAACGCTTGTATTGCTCTCCCAC
AACCCCGTTTTCACGGTTTAGGCTGCTCCCATTTCGCTCGCCGCTACTACGGGAATCGCTTTTGCTTTCTTTTCCTCTGGCTACTAAGATGTTTCAGTTC
GCCAGCTCCTATAGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGGATTCACCGCCGTATGGCTGACCGGCGATTACTAGCGATTCCTGCTTCATGCA
GGCGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCGCGAGATCGCGACCCTTTGTCCCGCCCATTGTAGCACGTGTG
TCGCCCAGGGCATAAGGGGCATGATGACTTGGCCTCATCCTCTCCTTCCTCCGGCTTAACACCGGCGGTCTGTTCAGGGTTCCAAACTCATAGTGGCAAC
TAAACACGAGGGTTGCGCTCGTTGCGAGACTTAACCCAACACCTTACGGCACGAGCTGACGACAGCCATGCACCACCTGTGTCCGCGTTCTTACGCGTTA
CTCACCCGTTCGCCACTGGAAACACCACTTCCCGTTCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCATCCTGAGCCAGGATCGAACTCTCCATGAG
ATTCATAGTTGCATTACTTATAGCTTCCTTATTCGTAGACAAAGCGGATTCGGAATTGTCTTTCCTTCCAAGGAAAACTTGTATCCATGCGCTTCAGATT
ATTAG