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Detailed information on CNT30148063


BLAST search results

BLAST vs Swiss-Prot:
sp|P05522|GUN1_PERAE, E-value = 1e-19

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553114Brachypodium distachyonOryza glaberrima32.730.8186.55171forward
CNT30361099Brachypodium distachyonSorghum bicolor31.3619.7487.8164forward
CNT30596016Brachypodium distachyonOryza meridionalis31.3624.2288.41164forward
CNT30575816Brachypodium distachyonOryza barthii30.9840.9186.42162forward

Expression of CNT30148063

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MPLCDEHAWGTSFQNPRHSSFFVDYCQGCNQSVY*

>peptide 2 (33 aa)
MNTLGVLLSKTHDIAHFLWIIAKDVINLYIEGF*

Sequence

>CNT30148063
TTCACAAATTGCACACAACTTCCAGTGTATGGTCGACAGATGATTTTATACTGATCTGTCATACTGACACGGAAATAGAAACTCTGTAAGCTTATGTTGT
CTGCTTTCTGTCTGTGGTCTTTGCTGTGTACCAAACAACCATCTGTTGCTCCCTCCTTTTGATGCTTATGAAATGTTCGGAGATCTGATTCTTCACGGTT
TCCAGCGACCATTGCTCCAACAAGGATATTTGGGTTTGCCTTCTTAGACTCCCTCCATTTGAAACCTCCTTTGCATCCGTACTTGACACCGTTATGGGGG
ATTGATGCCCCTCTGTGATGAACACGCTTGGGGTACTTCTTTCCAAAACCCACGACATAGCTCATTTTTTGTGGATTATTGCCAAGGATGTAATCAATCT
GTATATTGAAGGGTTTTGAGTGTCAGGTTATCGATTCCTGCTAATGTAACATTACTGCATTTGTTCAGATAATTGAGAATAAAACCTTACCTGCGACTTT
GCAAACTTGCGGAGCACATCCGT