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Detailed information on CNT30148014


BLAST search results

BLAST vs Swiss-Prot:
sp|A1EA05|ATPA_AGRST, E-value = 2e-49

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696665Brachypodium distachyonOryza sativa56.742.8393.12160forward
CNT30300142Brachypodium distachyonTriticum aestivum95.0421.1496.27268forward
CNT30553137Brachypodium distachyonOryza glaberrima36.8843.3396.15104reverse complement
CNT30250642Brachypodium distachyonAvena sativa49.2910.4392.81139forward
CNT3018020Brachypodium distachyonZea mays99.296.894.64280forward
CNT30680889Brachypodium distachyonTriticum urartu44.6817.5294.44126reverse complement
CNT30340274Brachypodium distachyonEragrostis tef39.7238.195.54112reverse complement
CNT30121210Brachypodium distachyonCitrus clementina74.475.3981.43210forward
CNT30575833Brachypodium distachyonOryza barthii93.6239.493.56264forward

Expression of CNT30148014

Peptides detected in this lncRNA

>peptide 1 (45 aa)
LNLWLFLKGKPFELFLNSFLQKDFRLLSECLARRYNFFELRFSIF*

Sequence

>CNT30148014
TGCTAAATTTATGGTTGTTCCTGAAGGGAAAACCGTTCGAGCTGTTCCTGAATAGCTTCCTTCAAAAGGATTTCCGCTTGCTCAGTGAATGTCTTGCTAG
AAGATATAATTTCTTTGAATTGAGGTTTAGTATCTTTTAGGTTTTTACGTAACTCACCTAGAAATTTATTTACCTGTTCAATTTCTAACGAATCAAGATA
TCCTCTCGTTCCGGTATAAATAGTAGCTATCTGCTCTTCCACTGGGAGAGGGTTTGCCTGGGATTGTTTAAGCAATTCCCTT