Detailed information on CNT30147444


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9XQR4|PSBN_PEA, E-value = 7e-24

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3019629Medicago truncatulaCitrullus lanatus63.0251.8286.38213reverse complement
CNT30194600Medicago truncatulaPisum sativum22.789.8685.7177reverse complement
CNT30390502Medicago truncatulaTriticum turgidum29.597.4991100reverse complement
CNT30357898Medicago truncatulaLactuca sativa54.149.1787.43183reverse complement
CNT30574487Medicago truncatulaVitis vinifera52.6628.8583.15178reverse complement
CNT3053422Medicago truncatulaAmborella trichopoda45.866.3689.03155forward

Expression of CNT30147444

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MILNYLNCSNEPPILRYWRLIISTSPHVLRMDLLVVERVAQKQYIGHTR*

Sequence

>CNT30147444
TCTTTTTTAGAGAACCCCCTATAGTTCCTACTAAAAAGACGAAATGATTTTGAATTACCTCAATTGTAGTAATGAGCCTCCAATATTACGATATTGGAGG
CTCATTATTTCAACTAGCCCCCATGTTCTTCGAATGGATCTCTTAGTTGTTGAGAGGGTTGCCCAAAAGCAGTATATAGGGCATACCCGGTAAAACTGAC
AATTAAACCAGATATAGAGATGGCAATTAGGGTTGCTGTTTCCATGATTATATAATATCAAGACTACAATGGATCTATAGGGTAATTTACAGCGTAATGG
TATACAAAGTCAACAGATCTCAATGAAAAAAAAAAAAA