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Detailed information on CNT30147395


BLAST search results

BLAST vs Swiss-Prot:
sp|Q36284|NU5M_MAIZE, E-value = 6e-78

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524653Medicago truncatulaSetaria italica7.6327.0599.07324reverse complement
CNT30197509Medicago truncatulaPisum sativum30.657.1297.151300forward
CNT30182368Medicago truncatulaSecale cereale12.2425.6495.77520forward
CNT30221864Medicago truncatulaHordeum vulgare15.8933.2594.22675forward
CNT30468144Medicago truncatulaSaccharum spontaneum16.8325.4193.99715forward
CNT30574574Medicago truncatulaVitis vinifera22.127.995.74939forward
CNT3056795Medicago truncatulaAmborella trichopoda6.854.3293.77289forward
CNT3024804Medicago truncatulaPopulus trichocarpa1.1820.669250reverse complement
CNT30104639Medicago truncatulaOryza rufipogon14.857.2994.28629forward
CNT30336162Medicago truncatulaCynara cardunculus1.1820.589450forward

Expression of CNT30147395

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPPVGVRAVSQSQCG*

>peptide 2 (42 aa)
MLLNDEGNSLLINLETSFPFVKCIEPGVDIIICRQIRILFHH*

>peptide 3 (40 aa)
MNSMLTLILLNLFRNSFALCLLLLTSLALLLVYLLSLRSF*

>peptide 4 (37 aa)
ALHSLGDGIHSLAFLLALLKAPVFTPLLLLCSLSSGS*

>peptide 5 (35 aa)
MLNPCRLNRSRMCLLLLETLDSQREGSHPFSPFLN*

>peptide 6 (33 aa)
MMMDASGAGGILLILFLRVSLAGFKIPPNLGKK*

>peptide 7 (91 aa)
MKRKDDEIASLRSQLEKVSEVEKSYEERDEERDDERDDERDDERDEDRVDERVDDKDGEKDGDKPKSSLSAANDDLKPPSYNSKKVKDKPG*

>peptide 8 (44 aa)
MKRGMKRGMMRGMMRGMMRGMKIGLMRGLMIKMVRKMGISRSPH*

>peptide 9 (55 aa)
MVGAANSDSARISFFGSTKGELAQKLDRGQDAVGRRRLTQVPPEPREMVAYYTAH*

>peptide 10 (92 aa)
TSLARGWDSFTCIPASTTKSSGLHAPTTAVQPFLGFVESGFPFTHNGGPHQTRQAATGHNALFAQQIHFEVDLSARPIVGMCKIYHKGPISQ*

Sequence

>CNT30147395
GCACTTCACTCGCTAGGGGATGGGATTCATTCACTTGCATTCCTGCTAGCACTACTAAAAGCTCCGGTCTTCACGCCCCTACTACTGCTGTGCAGCCTTT
CCTCGGGTTCGTAGAGTCGGGTTTCCCGTTTACCCACAACGGAGGACCCCACCAGACCAGGCAGGCGGCCACGGGTCATAACGCACTCTTCGCACAACAA
ATCCACTTTGAAGTTGACTTATCCGCTCGGCCAATCGTCGGAATGTGTAAGATATACCATAAGGGCCCAATATCTCAATAGCACCTTTGTCTAAAGCTTC
GAATGAGACTTCATATCCGAAACGCAGGAACGATCTGACTAGAAAGTCATTCAAAACTTGATCGAAGAACCAGCGTTTATTGAAGAAGCTATAGAGTCGA
TTACAAAAAGTACTTGTTTGAAAGGCTCGTTGGAATTGATCCGCTACGGGATTTACATTATACGCTACAGAAGCACCTGAAGTACTAAACAGAATAGGTA
TAAGTTTGGTAATGGTTGGAGCAGCAAACTCGGATTCGGCAAGAATCTCATTTTTTGGTAGTACGAAGGGGGAATTGGCCCAAAAATTGGATAGGGGTCA
AGACGCAGTCGGGCGCCGGCGGCTGACTCAAGTGCCCCCCGAACCGCGCGAAATGGTCGCCTATTACACGGCTCACTAACTCTGCCTGGGGTGTGGGGGT
ACCTATTATTCGTCGGCGGTCCGGCGCACCCCTACTCACTTAAAGGATGCTGCTTAATGACGAAGGAAATTCTTTATTAATTAATCTAGAGACTTCGTTC
CCTTTCGTTAAGTGCATCGAGCCAGGAGTGGACATCATCATCTGCAGACAAATCCGGATCCTGTTTCATCATTAGCTTAGCTAAAGTGGAATAGTATGAC
TGGCTTTCCGGAAAATGAGACGAAACCCGCTTTATAACTTTTTTCATTAACACTATACTCAAGTGGGTCTTCCTTTGGGCTTTGGCTGGCCTTGGCTTCG
GTGTTCCTCTCTCTGGGGTTCCTATTTTGTGCGTTGGAAGTTACGGCCTTCAATCTTTTGTTGGAGTGGTTGTCTATTTCTATAGGCGTCAGGCCTACAG
ACCTCCCCTCTACATCGATGATGATGGATGCTAGTGGGGCCGGGGGAATCCTTCTGATTCTTTTTTTGAGGGTCTCTCTGGCTGGTTTCAAAATACCGCC
GAACCTGGGGAAGAAATAAATTTGCAGCCTTCTCAGGGAGTCGGGCAGCGGCTTCCTGGTGCGCTCGAAATAAATTCCCCGGGCATAAGCGGGGAGTCTA
TCTTTAGGGACTTGGAACAGCCCGGAGGAGAGCCCGCACCTCAACCAGAGGCTGCGCAGCCTGGGCAAGTTCCAGAAGGGCCACTGGGGGAAGTCTTTGA
GAAGATCAATACAAGACTTCTCTTTGCTGCCTCTAAAAAGAGGGGGTGGCAGCCCCCCATAGATGATATTCTAACTTTGATTAACCTCAAAAGTCAGGTT
ATATTATATCTCGGATGGCCGAGCTGGACCCAGACCCTTTCTGGGTTGAAAACCGAACCAGCCTTCTGGTCTGGGAGACTCCATTTTAACAAAAAAAAGT
GGGAATATCGGCCAGAGACTCTTACAAACCGACTCGCCCAGTTGGATAGAGAGGGGACCAAATCTCCCTTTTCCGGGAACTTCTCGCATTGCGCGAAGAA
TATCCACAAAACTGACCCCCTGATTTCCGAGATGTTTTATTGTCTATCGTTGATTTTCCGAACAAATCTAATGGATCGGGATTGGTATAAGGTCACCTAT
TGCTACTAAGAACCTAACAGAACTTTTTAAAAGTTTTTAACACAATAGTTTTTCGGTTGGATCGAGGTCCACTTCTGGAACCCCACCCGCATTAGTAGAG
GTGCTTATTTACTAAAATACTGAGTTGGCCTTATCTTCTGCCACCGAGCCTGTGTTACTAATTCCCCTTCTTGGCTTGATAGTGAAGGTAGTGGTAGTCA
AGCATGTCTGTGGCTAGAGGAGAAAAGCATCTTTGAAGGAATTCTATTATAATAAGATATTTCCCTATGCTTTCTTAGTTAGAAGAAGAAAGTTGGGACA
GAGGCTTACAAGCCTACAGAGTCGGAAGTCGATGATAGAGGTTAATCATTACAAGCACTCTTAAGCGCGGGCAAAAAAGAAGCAACAAGATGCTTACTAT
ACTAAAGGTGGGACATAAAGGAATATCCTTTAAGGCATTTCGGGAATCGGTCTGATTCTATCTCAGTTTGTTCCCGGAAGGATCCCAAAGAATCGATCTC
TCTTTTAGTTGTTGAATCTCTCTTTGATTGATCAATGTGTGATATTCCGAATCCTCATTACTAATGGAATCGAAATTATCTCTGGATTGATCAGAAGATC
CTTTCTATCTACTCCGACTGAGAGATGGCCCCTTTGCGGTCGTGAAAGCCAATGCTGAACCCTTGCCGGCTTAATAGATCCAGGATGTGCCTTCTACTCC
TGGAGACCCTTGACTCTCAACGAGAGGGATCGCACCCCTTTAGCCCTTTCCTAAACTAAAGCTCTTCTCAACTACGAGCCGGAGGGGGGGTACCCGAACA
GAGCTCCTCAGCGGCACCTTCGAAGAGAAGCTCTTCCCGATCTTGATCTTTCTACCGATCTTGCTTGATCCTTAAACTTAATATAACAAAAACCAATATA
TTGGTTAACCCCGGAATTAGACTAAATATCAAGAGGGTAGCTATTTATGATTCTAATGAGACCTTGGTTGACACAAAACCTATTGAAGTTATTGACTTTG
CAGGTTATGAGAGTACTATACTAGAATATGAGATGAAGAGAAAAGATGATGAGATAGCAAGTTTGCGTTCACAACTAGAAAAGGTCTCTGAAGTAGAAAA
GAGTTATGAAGAGAGGGATGAAGAGAGGGATGATGAGAGGGATGATGAGAGGGATGATGAGAGGGATGAAGATAGGGTTGATGAGAGGGTTGATGATAAA
GATGGTGAGAAAGATGGGGATAAGCCGAAGTCCTCACTGAGTGCTGCTAACGATGATCTGAAACCACCTAGTTATAATTCTAAGAAAGTGAAGGATAAGC
CAGGTTAACTTGTAATCTCTGTCAGATGAGAATAGTTGGTAGCAAGCGGGGATAGAGTAGTTGGTTAACTCGTCAGGCTCATGCTCTGAAGATTGCAGGT
AACGAGAAGCGCTTCATCCCGATAGGGCAGATCCATGTCTATTGTTTTTCCGATATATAGAATATAACTACTGATATTATGAACTCTATGTTAACTTTAA
TTTTACTGAATTTGTTCAGGAATTCTTTTGCTTTATGTTTGTTACTTCTTACTAGTTTAGCTTTATTATTGGTATATCTACTGAGTCTACGTTCTTTTTG
ATCTGCGGATTTCACCCCTACACACGAAATTCCACTCTCCTCTGTCTCACTCAAGTGAATTGGTTTCGAGAGCATTCCACCAGTTTTTGGCGACTTTAAC
TTTCAACCCGATTCACCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCCCCGTCTTACCGCGGCTGCTGGCACGGAGTTAGCCG
GGGCTTCTTCCTCGAGTCCTGTCATGATCGCGCACTCGACGAAAGAGCTTTACAAGCGGCATTGCCCTTCTTCACTCACGCGATATTGCTGGATCGGGCT
TTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCA
TCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACTACGCAGGCTCATCAAACAGCGCTTTTTAGCTTTCTTCAGGATTTGGCCCGAACTGTT
CGGCAGATTCCCACGCATTACGCACCCGTTCGCCACTTTGTTTTCAACTATGCACTACTCCATCTGGCTTGAAGACCTCGTGGGGAAAGATAAGAATCCC
TTTTTTAAAGGTAAGGACTGAAGGGAATAAAAAAATAAAATAGAAAAAATCCCTTACCGGCCGACGGGACTCTACGTCTGGGTCTTATTCAATCTTAAAC
TCGGATTAGGAAGAGTGCCCTTGAACTACAGATCAATCATAATATAATAATAAAAAAAAAAGAAATGTCCCTCCTGACTTTAGCAAGTCAGTGATAAAAA
CCTGACTCTAACAAGTAAGCAAGTAAACTACCTTTAGGCGATAAAAATA