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Detailed information on CNT30147391


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 4e-14

BLAST vs NONCODE:
NONVVIT003033, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696398Medicago truncatulaOryza sativa19.0110095.84481reverse complement
CNT30618986Medicago truncatulaSesamum indicum42.2534.196.071069reverse complement
CNT30730480Medicago truncatulaCorchorus capsularis42.8986.6696.131085forward
CNT30632346Medicago truncatulaVigna unguiculata97.8388.4998.632475reverse complement
CNT30221907Medicago truncatulaHordeum vulgare37.0878.195.52938reverse complement
CNT30543268Medicago truncatulaBrassica napus36.7240.4896.99929reverse complement
CNT30258698Medicago truncatulaAvena sativa16.2850.9998.54412forward
CNT30207637Medicago truncatulaHelianthus annuus42.5355.0196.381076reverse complement
CNT30360996Medicago truncatulaLactuca sativa41.4271.8397.91048reverse complement
CNT30108930Medicago truncatulaOryza longistaminata34.3537.1496.66869reverse complement

Expression of CNT30147391

Peptides detected in this lncRNA

>peptide 1 (44 aa)
NRFTFILLWKVKVVSFSTRSLHTSRCLHLSPIEVLFKNLVRELV*

>peptide 2 (68 aa)
MCRFPNQKIGEHPFSRSYGVILPSSFDMVLSSALVYSTCSPVSVWGTVSSPGGSPSQFEVFSWKFQPC*

>peptide 3 (39 aa)
MADFRLCSTSRSHSQAGLYHYAHEQNLSLSLPSHTSVTL*

Sequence

>CNT30147391
AATAGGTTTACTTTTATTTTGTTATGGAAAGTGAAAGTAGTTTCGTTTAGTACGAGATCGCTTCACACCTCGCGGTGCTTACACCTCTCGCCTATCGAAG
TTCTGTTCAAAAACCTCGTTCGAGAACTTGTATAGAGAAGGATTTCCCGCTTAGCAGCAGTTCTTCCATACCAACTTAGCAGCCCGGCGCTGCTATTGGC
ATAACAACCGGTACACCATAGGTTGGCCCAACCCAGTCCTCTCGTACTAGGGCTGGCTCCTCGCAGTTCTCCCTTTAACACCAACGGTAGATAGGAACCG
AACTGTCTCACGACGTTCTAAACCCAACTCACGTACCACTTGAATCGGCGAACAACCGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATGAGTCGA
CATCGAGGTGCCAAACGACTCCGTCGATAAGAGCTCTTGGGAGTCATCAGCCTGTTATCCCCGGCGTACCTTTGATCCGTTGAGCGAGAGCCCTTCCACA
AGGGACTCCCGGATCACTATGGCCGACTTTCGTCTCTGTTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCACGAGCAGAATCTTA
GCTTGAGCCTACCTTCGCACACCTCCGTTACTCTTTAGGAGGCATCCGCCCCAGATAAACTACCCACCTCGCAGTGTCCCGCCCCCCCCGAATTTTCGGT
GCGGCGGTTAGGCATCCTTAGACGAAAGAGTGGTCTTTCAGGATTGGTCGTTCTGTGTCATCACCTCCCACCTATCCTACACATTCGATCAAGGTTGTCA
CTGCGAAGCTATAGTTAAGGTGCACGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGAC
AGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGG
CTTCCATTCAAAGCTTATAACACTTCTCCTTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCACTTAGCAGAGTCCTGTGTT
TTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAATCAAAAGATAGGAGAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTT
CCTTCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGGGTACGGTCAGTTCACCGGGAGGATCGCCCTCCCAATT
CGAAGTTTTTTCCTGGAAGTTTCAACCTTGTTGACTATGACAACAGTCGCGACTATAAACAGACTCGCTACTATGGCAGGGCGGTACGCTCTGCTCTCTC
GCGACCCCTACTCTAACGAGTAAGCAAGTAAACTACCTTTTGAAGCGCCAGTCGCGTAGGGCGACCGGGCCAGGCCGAGTCAGAAAGGCTTTGATGACTC
AAGGTTAATCTTAGGGAAAGGAGAGTGAGGGGAAGAGGGGGCAGCCCTCGGCCCGATCATCCAATTCACTCCAACAGACAGGCATGGTTCTGTAGTCAAA
GCAACTTCGTCACTTTCGTGTACCCATCGGACGGCAGCCCTTTCGGGGCTTCCTTAGGGACCGATTAACTCTGCGTAGATTGACTGAACGCAGAAAGCCT
TCCACTGGCAGGCGATCGTGTTTTTCACAGGATTTATCGTTACTCATGTCAGCATTCTCACTTCTGATATCTCCAGGTGTTGTCACCAAAAACCTTCCCC
GATTGACAGAACGTCCCGCTACTGACACTTGAACAACTTTCAAGGTCTCGTCGCTTCGGTGAATCACTTGAGCCCTGATACATTTTCGGTGCCATGGAGC
TAGACCAGTGAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCGCTCGATCACTTCCTTTTCCACTAAGTGATTG
CTTAGGGACCTTAGCGTACGATCTGGGCTGTTTCCCTCTCGACTTTGGATCTTAGCACCCTAAAAGTCTGTCTGTACAAACGATCTAGGCCTGTATTCGG
AGTTTCCCTGGGGTTGGTAAGGCGAAATGGGGCCACCCTAGCCCATTGAGTGCTCTACCTCGGGCCATCGACATCATACGCTCTACTGAAATAGATTTCG
CGGAAAACCAGCTATATCCGATCTTGGTTGGCCTTTCACCCCTAGCCACAAGTCATCCCCGTATTTTGCCACATACGTGGGTTCGGTCCTCCAAGGCCTG
TTAGAGCTCTCTTCAACCTGCTCATGGCTAGATCGATCGGTTTCGGGTCAAATAGGAAGAACTAGAAGATTCCACCTCTGAAAGGCGCCTACACCTAATG
GCTTAAGCCGCTGTTCCCATTTTCTCGCTGACCCATCATGCAAAAGGTACGCCGTTAGAGTGAGTGCGCTTTACTAATAGAATCTCAAGTAAAGGCTCTA
AGCTCCTTCGACTGATTTACCAGAACGATG