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Detailed information on CNT30147390


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3067373Medicago truncatulaLeersia perrieri36.1392.7297.5280reverse complement

Expression of CNT30147390

Peptides detected in this lncRNA

>peptide 1 (89 aa)
MIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPPVGVRAIPTHYAPVRHFVFNCSHLLGETSYLHARSLFSFCPAPRKQRSTCMC*

>peptide 2 (87 aa)
MLSHSSVGRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSELVSRAFHQFLATLTFNPIHRLRALYAQSFRRTLAPPVLPRLLARS*

Sequence

>CNT30147390
TCCACCGCTTGTGCAGGCCCCCGTCAATTCCTTTGAGTTTCGGTCTTGCGACCGTACTCCCGAGGCGGAGTGTTTAACGCGTTAGCTGGGCCCCTGATCC
ACGTAGACCAAGGGCGAACACTCATCGTTTACGGCATGGACTACCAGGGTATCTAATCCCGTTCGCTCCCCATGCTTTCGCACTCCAGCGTCGGTAGGGA
CCCAGAGAGCTGCCTTCGCTTTTGGCGTTCCTTCGTAGATCTGCGGATTTCACCCCTACACACGAAATTCCACTCTCCTCTGTCTCACTCAAGTGAATTG
GTTTCGAGAGCATTCCACCAGTTTTTGGCGACTTTAACTTTCAACCCGATTCACCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCC
CCCCCGTCTTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTCGAGTCCTGTCATGATCGCGCACTCGACGAAAGAGCTTTACAAGCGGCAT
TGCCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCATTCCCACGC
ATTACGCACCCGTTCGCCACTTTGTTTTCAACTGTTCCCACCTCCTGGGCGAGACAAGCTACCTTCACGCTAGGAGCCTCTTTTCCTTCTGCCCAGCTCC
CCGAAAACAACGTTCGACTTGCATGTGTTAAGCATATAGCTAGCGTTCCTTCTGAGCCAGGATCAAACTCTTCTT