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Detailed information on CNT30147386


BLAST search results

BLAST vs Swiss-Prot:
sp|Q35639|NU5M_PEA, E-value = 2e-116

BLAST vs NONCODE:
NONTPRT002187, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30490123Medicago truncatulaOlea europaea54.6748.4297.86843forward
CNT30505422Medicago truncatulaNicotiana attenuata63.6236.8797.15981forward
CNT30712870Medicago truncatulaGlycine max48.5745.0798.93749forward
CNT3046714Medicago truncatulaPrunus dulcis13.6298.5988.57210reverse complement
CNT30157615Medicago truncatulaPistacia vera30.0963.2295.47464forward
CNT3092080Medicago truncatulaSolanum tuberosum21.9858.1594.99339forward
CNT30592527Medicago truncatulaMusa acuminata12.2656.5998.41189forward
CNT3089191Medicago truncatulaVigna radiata28.9933.0696.87447forward
CNT30511493Medicago truncatulaSolanum lycopersicum1932.7799.66293reverse complement
CNT30242955Medicago truncatulaAvena sativa20.2333.4497.12312forward
CNT3082633Medicago truncatulaBrassica juncea20.4395.7496.83315forward
CNT30605266Medicago truncatulaGossypium raimondii51.6238.0397.86796forward
CNT30595572Medicago truncatulaOryza meridionalis17.6431.7495.22272forward
CNT3057903Medicago truncatulaAmborella trichopoda62.1339.9892.8958reverse complement
CNT30118490Medicago truncatulaCitrus clementina6.0320.9994.6293forward
CNT3038420Medicago truncatulaCucumis melo62.1367.0996.76958forward
CNT30331546Medicago truncatulaDioscorea rotundata16.661.3992.97256reverse complement
CNT30113381Medicago truncatulaFicus carica29.25101.1295.79451reverse complement
CNT30725625Medicago truncatulaLupinus angustifolius34.9530.9999.26539forward

Expression of CNT30147386

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MRTISRRSLEPLLEILLVKRTHSNGVPFA*

>peptide 2 (30 aa)
MMSMARGRALNGLGWPHFALPTPGKLRIQA*

>peptide 3 (70 aa)
MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESCSSVSSGTFWEHLAIMKTPAVTIVAA*

Sequence

>CNT30147386
ACACTGTGTGTTCAAGCCCCGGCACATTTAAAGGGCGCGGTGAACTGTAATTGTGAAAAGGTTGGAAGATCTGGCCAAAGAAGGTGAGAGCCCTGTAGAT
TCGTTCCCATGGTTCGATCCTTCCCAGTAAAACGCGGCGTGTTCGAATTCTGATCGCTTTTACGCGAGAAAGGGGGACCACCCTCTAAGCCTAAGTATTC
CTCAATGACCGATAGCGTACAAGTACCGTGAGGGAAAGGTGAAAAGAACCCTATTTAGGGAGTGCAATAGAGAACCTGAGATCCGATGCGAACAATCAGT
CGAAGGAGCTTAGAGCCTTTACTTGAGATTCTATTAGTAAAGCGCACTCACTCTAACGGCGTACCTTTTGCATGATGGGTCAGCGAGAAAATGGGAACAG
CGGCTTAAGCCATTAGGTGTAGGCGCCTTTCAGAGGTGGAATCTTCTAGTTCTTCCTATTTGACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAG
AGAGCTCTAACAGGCCTTGGAGGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCCAACCAAGATCGGATATAGC
TGGTTTTCCGCGAAATCTATTTCAGTAGAGCGTATGATGTCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCATTTCGCCTTACCAACCC
CAGGGAAACTCCGAATACAGGCCTAGATCGTTTGTACAGACAGACTTTTAGGGTGCTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAA
GGTCCCTAAGCAATCACTTAGTGGAAAAGGAAGTGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGCAGCCATCCTTTGAAGAAAGCGTAATAGCT
CACTGGTCTAGCTCCATGGCACCGAAAATGTATCAGGGCTCAAGTGATTCACCGAAGCGACGAGACCTTGAAAGTTGTTCAAGTGTCAGTAGCGGGACGT
TCTGGGAGCACCTTGCTATCATGAAAACGCCAGCTGTGACCATAGTAGCTGCATGAATCAAAGCGGATACAGGAGTGGGACCCTCCATAGCATCGGGTGA
CCAAGTATGCGATCCTATCTGTGCAGATTTCCCAACAGCACCAATAAGAAGTAAAATACAAATCAGAGTTATGGCATTCAATCTCATATTGCAAGAAATC
CAAGAATTTCTGGGGGCACTAGCACGAGCAAAAATGGTTGAAAAGTCTACTGTTTGAAAGAGAGTAAAACGACCCGAAATCCCAGGAGCTAATCCAAAAT
CACCTACTCGATTGACAGGCATAGCTTTTGTAGCTGCTTTATCTGCCTGAAGTCGTGTAAACCAGAAATGAATTAACAAATATGAAGCAAGACCTACTCC
CTCCCATCCCAGGAATAATTGAAGAGAGTTATCTCCAGTCACCAACATTGGCATAAAAAAAGTAAGAATGGATAAATAACACATAAATCGAGGGCTATGC
GGATCCTCAGACATATATGAAATGGAATAAAGATGGACCAAG