Detailed information on CNT30147369


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30519100Medicago truncatulaJuglans regia10076.8296.8782forward
CNT30730407Medicago truncatulaCorchorus capsularis100.1382.8697.06783forward
CNT3048148Medicago truncatulaPrunus dulcis10049.6297.44782forward
CNT30265842Medicago truncatulaBrassica rapa73.79100.1797.57577forward
CNT30206551Medicago truncatulaHelianthus annuus70.0810098.36548forward
CNT30628171Medicago truncatulaDaucus carota10077.7397.31782forward
CNT30368933Medicago truncatulaSorghum bicolor100.1362.0496.68783forward
CNT30705847Medicago truncatulaPrunus avium10050.1696.42782forward
CNT30117075Medicago truncatulaOryza nivara100.1363.596.55783forward

Expression of CNT30147369

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MKYECPRLSLLIITPIPKANTIGSESCGVIPC*

>peptide 2 (44 aa)
MKFQRLPGPVGQGYRLVEYISVARVRPRTSKGITDLLLPQTSVA*

>peptide 3 (66 aa)
MLSQLFVFHKSKNFTSDYEIRMPPTVPVNHYSDPEGQHNRIRILWCYPMLMYPERRLALSTLISSK*

Sequence

>CNT30147369
AGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGAATTCCTCGTTGAAGACCAACAATTGCAATGA
TCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAA
CATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAGCGGCCATAGTCCCTCTAAGAAGCTGGCCGTGGAGGGTTACCTCCACATA
GCTATTTAGCAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAGACTTTGATTT
CTCATAAGGTGCCAGCGGAGTCCTAAAAGCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCC
CCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTATGAAATA
CGAATGCCCCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGATCAGAATCCTGTGGTGTTATCCCATGCTAATGTATCCAG
AGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGAGGCACGACCCGGCCAATTAAGGCCAGGAGCG