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Detailed information on CNT30147198


BLAST search results

BLAST vs Swiss-Prot:
sp|P69322|UBIQP_PEA, E-value = 0.0

BLAST vs NONCODE:
NONTPRT002153, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3019912Medicago truncatulaCitrullus lanatus64.5654.5282.44911forward
CNT3086353Medicago truncatulaVigna radiata81.5753.7185.931151forward
CNT3066849Medicago truncatulaLeersia perrieri80.8685.481.161141forward
CNT3024139Medicago truncatulaPopulus trichocarpa61.5280.8282.95868forward
CNT30120688Medicago truncatulaCitrus clementina63.3681.8782.21894forward

Expression of CNT30147198

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSNVMVFPVKVFTKICMPPLKRRTR*

>peptide 2 (61 aa)
MSLCWSGGIPSLSCILALTLSMVSELSTSRVIVFPVRVFTNICIPPRRRSTKWRVDSFWML*

>peptide 3 (48 aa)
MKSGFFLDVIICQGSAIFKLLSSKNQPLLVWGNAFLVLNLSLYIVNCV*

>peptide 4 (45 aa)
MVSELSTSRVMVLPVRVLTKICIYYTLKRNWVLGLNESLFQRNRFC

>peptide 5 (48 aa)
MESGFLLDVIISKGTPILQLLASKNQSLLVWWDSFLVLNFCLNIVYGI*

Sequence

>CNT30147198
TTAATCTCTGAATGACAGCAATTAGTTCATATTCATTAAGTTTAACAAAGAGAAAGAGAACAGATACGAGTACCACAACAAACTAAAGATAAGGGCCATT
ATCAAGACCCATGCAACAAGTTCTGAAATTGGAAAACCATAAACCTGCTTAGGATTCAACACACAATAAAAGACAACTACACAAACCTAAATACTTAAAA
TCCACCACGAAGACGCAAAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTTCCATCCTCCAATTGCTTCCCAGCAAAGATC
AACCTCTGCTGATCTGGTGGGATTCCTTCCTTGTCCTGGATTTTTGCCTTCACATTATCAATTGTGTCTGAACTTTCTACCTCTAAGGTGATGGTCTTAC
CGGTCAACGTCTTCACAAAGATCTGCATGCCTCCCCTCAGACGAAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCAGCCAAAGTCCGGCC
ATCTTCAAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCAGGTGGAATTCCCTCCTTATCCTGTATTTTTGCCTTAACATTATCGATGGTGTCTGAG
CTTTCCACCTCCAATGTAATGGTCTTTCCTGTCAAAGTCTTCACAAAGATCTGCATGCCTCCCCTCAAACGAAGGACAAGATGAAGAGTGGATTCTTTCT
GGATGTTATAATCTGCCAAGGTTCTGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATCTT
AGCCTTTACATTGTCAATTGTGTCTGAGCTCTCCACCTCCAAAGTAATCGTTTTTCCAGTTAGGGTCTTAACAAAAATCTGCATACCACCACGAAGTCGC
AAGACAAGATGAAGAGTCGACTCTTTCTGGATGTTATAATCAGCTAGAGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAAGATGAGCCTCTGCTGGTCTG
GTGGGATACCCTCTTTGTCTTGTATCTTGGCCTTAACATTGTCAATGGTATCAGAGCTCTCCACCTCAAGGGTAATCGTCTTTCCAGTGAGAGTCTTCAC
AAATATTTGCATACCACCACGGAGACGGAGCACCAAATGGAGAGTGGATTCCTTTTGGATGTTATAATCAGCAAGGGTACGCCCATCCTCCAGCTGCTTG
CCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGGATTCCTTCCTTGTCTTGAATTTTTGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAG
TGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATTTGCATCTATTATACCTTGAAACGGAATTGGGTGCTAGGTTTGAATGAATCTCTTTTCCAAAGGAA
CCGGTTTTGTA