Detailed information on CNT3014691


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30552242Zea maysOryza glaberrima26.4818.190.7976forward
CNT3066598Zea maysLeersia perrieri26.8312.7993.5177forward
CNT30595582Zea maysOryza meridionalis26.4814.4590.7976forward
CNT30369166Zea maysOryza glumipatula26.4814.7390.7976forward
CNT3099716Zea maysOryza rufipogon26.4813.4390.7976forward
CNT30115583Zea maysOryza nivara26.1318.0790.6775forward
CNT30603545Zea maysOryza punctata26.8314.6190.9177forward

Expression of CNT3014691

Peptides detected in this lncRNA

>peptide 1 (32 aa)
RGDVGISITKKFYSGHELIVVIRTGAECVHVR*

Sequence

>CNT3014691
TGCGTGGTGATGTAGGTATTAGTATTACGAAGAAGTTTTATTCAGGTCACGAGCTTATTGTCGTAATTCGTACAGGAGCTGAGTGCGTGCACGTACGATA
GCCAAGCACGAACGGGCGTGGATGCCGGCCGCCGGGCGGCTCAGTTAGCCCTGGCGAGGAAGCTCTCCCTGCGCTCGTGGACCTCGCCGGTGCAGGTGTT
GATGTCCTCCTCGACCCTGGTCTCGCGCACCACGAAGCCGTGGCCGCCGTGGTGACCATGGTGGTGGTGGGTCGGCCTCGCCTCGGC