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Detailed information on CNT30146878


BLAST search results

BLAST vs Swiss-Prot:
sp|P00869|RBS2_PEA, E-value = 1e-42

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30268359Medicago truncatulaChenopodium quinoa16.0133.6881.03195forward
CNT3069740Medicago truncatulaQuercus suber16.6722.4183.25203forward
CNT30235483Medicago truncatulaBrassica oleracea9.2820.0784.07113forward
CNT30649450Medicago truncatulaRosa chinensis16.6734.2981.28203forward

Expression of CNT30146878

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MNLVNIRCVCNETDALNLTNFVESDDTDKGIRVSINNFIKLLQHLRSISCSKQRQLPHCPVTSVIVSW*

Sequence

>CNT30146878
GATTCTTTTAAGTAACTTGGGAATTAAGTAACCATTTCATTCATTAACTCTTAATCTTATACATCCCATTTTTCAAATCCAAAAACAGAAATATAAAAAC
ACAGAAGGAAAACATTTCCCTGAAAAAGAAATGGAAATTAAAAGCAAAACATAAATGGGAAGAAGAAAAAAGTTCTTCCAAATTCCAGTGCAATGAACTT
AGTAAACATCAGGTGTGTGTGCAATGAAACTGATGCATTGAACTTGACGAACTTTGTCGAATCCGATGATACGGACAAAGGCATTAGGGTAAGCATCAAC
AACTTCATCAAGCTCCTTCAACACTTGAGAAGCATCAGTTGCTCCAAACAAAGGCAACTTCCACATTGTCCAGTAACGTCCGTCATAGTATCCTGGTGAA
CTGTGGTTCTCACGGTACACAAATCCTTTCTGCAAGTAGATTAACCATGACAAACCGATTAACCATTTAAGTTTAAAACTATATATATGTTCATTGAAAA
GGCATTGAAAATAAATTAAAACTAGACCTCGGTCTCGAATTCCAAGCAAGCAACCCATCCCTTCCTTATAAGGTATTCAACTTCTTTCGCCAATTAAACA
CTGGAGACATTTCCTTTAAAAAGAAAAGGAAATTACAAACAGAACAAATGGAGAGAAAAAAAATGTTCCTCCAATGGCAGATAGTAAACTCTCAAATTTA
GTAAACATCAGGTGTGTGTGTGCAATGAAACTGATGCATTGAACTTGACGAACGTTGTCGAATCCGATGATACGGACAAAGGCATTAGGGTAAGCAACAA
CAACTTCATCAAGCTCCTTCAACACTTGAGAAGCATCAGTTGCTCCAAACAAAGGCAACTTCCACATTGTCCAGTAACGTCCGTCATAATATCCTGGTGA
ACTGTGGTTCTCACGGTACACAAATCCTTTCTGCAAGTAGATTAACCATGACAAACCGATTAACCATCTAAGTTCAAAACTATATATATGTTCGTTGAAA
AGGCATTGAAAATAAATTAAAACTAGACCTCGGTCTCGAATTCCAAGCAAGCAACCCATCCCTTCCTTATAAGGTATTCAACTTCTTTCGCCAATTGTTC
TCTGGTCAATGGTGGAAGATATGAAAGAGTCTCAAACTTCTTCTTGCCAATAGGAGGCCACACCTAAAATTGCACAAAATGGTTAACAAACTTGTGTGCA
TTTTTCAACGAATCTCTA