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Detailed information on CNT30146680


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT000007, E-value = 1e-64

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690840Medicago truncatulaOryza sativa41.111.1586.6515forward
CNT30678279Medicago truncatulaSetaria viridis20.8330.4286.97261forward
CNT3019929Medicago truncatulaCitrullus lanatus19.5556.4592.24245forward
CNT30629265Medicago truncatulaVigna unguiculata32.435.8789.9406forward
CNT30201083Medicago truncatulaPisum sativum43.8925.7695.09550forward
CNT30181337Medicago truncatulaSecale cereale41.3424.0886.68518forward
CNT30290424Medicago truncatulaTriticum aestivum41.3432.486.87518forward
CNT30225281Medicago truncatulaHordeum vulgare15.6458.5189.8196forward
CNT30565170Medicago truncatulaActinidia chinensis27.7730.4789.94348forward
CNT3089355Medicago truncatulaVigna radiata1735.7490.14213forward
CNT30539441Medicago truncatulaBrassica napus42.1410.888.45528forward
CNT30239038Medicago truncatulaBrassica oleracea21.0721.1793.56264forward
CNT30554212Medicago truncatulaOryza glaberrima26.268.7286.93329forward
CNT30434683Medicago truncatulaAegilops tauschii24.9852.6185.62313forward
CNT30258743Medicago truncatulaAvena sativa37.2777.785.87467forward
CNT3060115Medicago truncatulaArabidopsis lyrata41.9822.1889.35526forward
CNT30265852Medicago truncatulaBrassica rapa8.2223.5786.41103forward
CNT3017995Medicago truncatulaZea mays25.5420.7187.81320forward
CNT30606537Medicago truncatulaGossypium raimondii41.5830.9986.56521forward
CNT30627897Medicago truncatulaDaucus carota24.520.490.88307forward
CNT30683107Medicago truncatulaTriticum urartu30.0934.8186.74377forward
CNT30477828Medicago truncatulaArabidopsis halleri21.0751.8792.05264forward
CNT30622174Medicago truncatulaCajanus cajan30.6552.7593.49384forward
CNT30596588Medicago truncatulaOryza meridionalis18.5210086.64232forward
CNT30356508Medicago truncatulaLactuca sativa24.2643.4991.45304forward
CNT30434475Medicago truncatulaPapaver somniferum24.7480.7389.03310forward
CNT3058691Medicago truncatulaAmborella trichopoda15.8844.5290.45199forward
CNT30121217Medicago truncatulaCitrus clementina27.2138.0288.56341forward
CNT30578317Medicago truncatulaOryza barthii20.1152.0784.92252forward

Expression of CNT30146680

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MLPELLDSLRHQVHFPKGVLKFLHRIEVQNHLQISRSEQAYAKHEYHLKQQAEHQVKKPNPE*

>peptide 2 (35 aa)
MIFLSINNCMHCTPNSLANTALFIMSSQVPAVAFK*

>peptide 3 (48 aa)
MSQWKIRQLPLHLLLQPELQVEDLLGMLPRYQYLWFHSQEYNKSIDNL*

Sequence

>CNT30146680
TGATAATTACTGGATTAAATAGTATCCATTGCTGGGAATTCAAATTTGATCTCCTTCCAGACTTCACAAGCAGCAGCTAATTCAGGACTCCATTTGGTAG
CTTCACGGATAATTTCATTACCCTCACGAGCAAGATCACGTCCTTCATTACGAGCTTGTACACATGCTTCCAGAGCTACTCGATTCGCTACGGCACCAGG
TGCATTTCCCCAAGGGTGTCCTAAAGTTCCTCCACCGAATTGAAGTACAGAATCATCTCCAAATATCTCGGTCAGAGCAGGCATATGCCAAACATGAATA
CCACCTGAAGCAACAGGCAGAACACCAGGTAAAGAAACCCAATCCCGAGTGAAAAAAATACCGCGACTTCTATCTTTTTCAACAAAATCATCACGTAGTA
AATCAACAAAACCTAAAGTAATATCCCTTTCTCCTTCCAGTTTACCTACTACAGTACCAGCGTGAATATGATCTCCACCTGACATACGTAACGCTTTAGC
TAATACACGAAAGTGCATACCATGATTTTTCTGTCTATCAATAACTGCATGCATTGCACGCCCAATTCTCTAGCAAATACAGCTCTTTTCATCATGTCTT
CACAGGTGCCCGCAGTAGCATTCAAATAATGTCCTTTGATTTCACCAGTTTCGGCCTGTGCTTTATAAATAGCTTCGGCACAAAATAAGAAACGGTCTCT
CCAACGCATAAATGGTTGGGAGTTCACATTTTCATCATCTTTGGTAAAATCAAGTCCACCACGTAGACATTCATAAACTGCTCTACCGTAATTTTTAGCG
GATAAACCCAATTTAGGTTTAATACAACAGGTTCGATGTGGTAGCAGCGTCCTTTATAACGATCAAGACTGGTAAGTCCATCGGTCCACACGGTTGTCCA
TGTCCCAGTGGAAGATTCGGCAGCTACCGCTGCACCTGCTTCTTCAGCCGGAACTCCAGGTTGAGGACTTACTCGGAATGCTGCCAAGATATCAGTATCT
TTGGTTTCATAGTCAGGAGTATAATAAGTCAATCGATAATCTTTAACACCAGCTTTGAACCCAACCGTTGCTTTAGTTTCTGTTTGTGGTGACATAAATC
CCCCTTACAACTCATGAATTAAGAATTCTAGCAACAACAAGGTCTACTCGACATAACTTAGGAGTTAATAAAACCTTTCACAAATGATCGATCAACTAAT
ATTATCAATTAATCCGAATGGTTCGTTATTTAATTTAACCATGATATTTGATT