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Detailed information on CNT30146667


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30546122Medicago truncatulaIpomoea triloba26.2421.0286.4974forward
CNT30616186Medicago truncatulaSesamum indicum20.2124.6887.7257forward
CNT30404910Medicago truncatulaBeta vulgaris24.4715.486.9669forward
CNT30555939Medicago truncatulaOryza glaberrima28.3720.5183.7580forward
CNT30440942Medicago truncatulaAegilops tauschii29.4338.2584.3483forward
CNT30312036Medicago truncatulaCamelina sativa28.7224.788.8981forward
CNT30721746Medicago truncatulaTriticum spelta29.435.1684.3483forward
CNT30338628Medicago truncatulaEragrostis tef34.0427.0484.3896forward
CNT30104724Medicago truncatulaOryza rufipogon28.377.6683.7580forward
CNT30117466Medicago truncatulaOryza nivara28.377.1683.7580forward

Expression of CNT30146667

Peptides detected in this lncRNA

>peptide 1 (93 aa)
PRSIIIRIMTDNNSIITRSSSKNTTVTNMTLNITNHSTFRDRSKRERKRAGPLRWCVWDLKTEPAPLRWARMTRPILAAARNGERGVRYEEVLT

>peptide 2 (32 aa)
MGFENGTCSLTLGTDDTTHFSGGEKWRKGSEV*

Sequence

>CNT30146667
CCTAGAAGTATCATTATCAGGATTATGACTGATAACAATAGCATAATCACCAGAAGCTCTAGCAAAAACACCACGGTCACCAACATGACCCTCAACATTA
CAAATCACAGCACCTTCAGGGATAGATCTAAGAGGGAACGGAAACGGGCGGGGCCTTTGCGGTGGTGCGTATGGGATTTGAAAACGGAACCTGCTCCCTT
ACGTTGGGCACGGATGACACGACCCATTTTAGCGGCGGCGAGAAATGGAGAAAGGGGAGTGAGGTATGAAGAAGTTCTAACC