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Detailed information on CNT30146402


BLAST search results

BLAST vs Swiss-Prot:
sp|P07371|CB22_PEA, E-value = 2e-126

BLAST vs NONCODE:
NONMTRT001605, E-value = 5e-156

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30514020Medicago truncatulaJuglans regia56.1964.0781.48567forward
CNT30359036Medicago truncatulaLactuca sativa58.2855.1682.14588forward
CNT30409978Medicago truncatulaPapaver somniferum62.6466.2581.01632forward

Expression of CNT30146402

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MSWVDGESLIAFPTNDEEERDIVEAAILVFYSLLSKQMKL

>peptide 2 (40 aa)
TVHIHCSLPCFSKTIHFIHIICTNLGRRKKDVMRHTFFNI*

Sequence

>CNT30146402
ACCGTTCACATTCATTGCTCTCTCCCTTGTTTTAGTAAAACCATTCATTTCATTCACATAATTTGTACAAACTTAGGAAGAAGAAAAAAAGATGTAATGC
GCCATACGTTTTTCAACATATAACACAATAACAAATTCAAAGTTTGATATTCAAGTCATTCACTACTTCTCATTTGGTGTAGTTATTGCTTATTTTCCAG
GGGCAAAGTTTGTGGCATAGGCCCAAGCATTGTTGTTAACTGGATCAGCAAGGTGGTCGGCGAGGTTCTCGATAGGTCCCTTTCCAGTCACAATGGCTTG
AACGAAAAATCCAAACATAGAGAACATAGCTAACCTACCATTTTTTAGTTCTTTCACCTTCAACTCTGCAAAAGCCTCGGGATCTTCGGCAAGGCCCAAG
GGGTCAAAGCTGCCACCTGGGTAGAGTGGGTCCACCAGCAATACGGTAACCCTCAACAGCACCCATTAAGATAACTTGGACAGCCCATATAGCAAGGATG
CTTTGTGCATGGACTAGACTTGGGTTACCCAAGTAGTCAAGCCCACCCTCACTAAAAATTTGGGATCCTGCCTTGAACCATACAGCCTCGCCGAATTTGA
CACCATTGCGAGATAAGAGCTCAGGGAAGACACATCCCAAGGCACCCAACATAGCCCATCTACTGTGGATGACCTCGAGTTCACGGTTTTTGGCAAATGT
CTCTGGGTCAGCAGAAAGTCCAGCAGTGTCCCAACCGTAGTCACCAGGAAATTCACCGGTGAGGTAGGATGGGGCTTCACCGGAGAATGGGCCCAAGTAC
TTGACACGGTCTGGACCGTACCAAGGACTTCCAGAAGGAACAGACTTCTTGGTGGTTGCTTTCCTCATTGTGACTCTTCCCACCCCAATGTCTTGGGTGG
ATGGGGAAAGCTTGATTGCCTTCCCTACAAATGATGAAGAAGAGAGAGACATTGTTGAAGCCGCCATTTTAGTATTTTATTCCTTACTAAGTAAACAAAT
GAAGCTCAA