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Detailed information on CNT30146374


BLAST search results

BLAST vs Swiss-Prot:
sp|P07371|CB22_PEA, E-value = 3e-165

BLAST vs NONCODE:
NONMTRT001605, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316133Medicago truncatulaCorylus avellana69.8969.0983.11657forward
CNT30500907Medicago truncatulaCoffea canephora69.6869.9883.51655forward
CNT30404043Medicago truncatulaBeta vulgaris56.2847.9683.74529forward
CNT30525395Medicago truncatulaPhaseolus vulgaris72.1366.5485.25678forward
CNT30628736Medicago truncatulaVigna unguiculata61.778.3886.03580forward
CNT3046618Medicago truncatulaPrunus dulcis70.3279.0781.54661forward
CNT30609649Medicago truncatulaGossypium raimondii61.4976.3584.08578forward
CNT30621493Medicago truncatulaCajanus cajan70.5349.485.67663forward
CNT30359492Medicago truncatulaLactuca sativa66.3872.9883.33624forward
CNT30153357Medicago truncatulaPrunus persica69.6837.0981.53655forward
CNT30337332Medicago truncatulaCynara cardunculus70.8550.4284.68666forward

Expression of CNT30146374

Peptides detected in this lncRNA

>peptide 1 (35 aa)
FGRINCTILWHFIRSATVLIICMIIIHIITFISLS*

>peptide 2 (37 aa)
MHHMFLKAYEFSLFASEITSHWYGVVLAHFPGAKFVA*

>peptide 3 (51 aa)
MHDHHSHNHIHFTLLKSTNLKELKKSKCTICFSKHMNSHCLLQKSLLIGMV*

Sequence

>CNT30146374
TTTTGGAAGAATCAACTGCACAATACTTTGGCATTTCATTAGGTCTGCTACAGTGTTGATAATATGCATGATCATCATTCACATAATCACATTCATTTCA
CTCTCTTAAAAAGTACAAACTTGAAAGAATTAAAAAAATCTAAATGCACCATATGTTTCTCAAAGCATATGAATTCTCATTGTTTGCTTCAGAAATCACT
TCTCATTGGTATGGTGTAGTTTTGGCTCACTTTCCAGGGGCAAAGTTTGTGGCATAGGCCCATGCATTGTTGTTAACTGGGTCAGCAAGGTGGTCGGCGA
GGTTCTCGATAGGTCCCTTTCCAGTCACAATGGCTTGAACGAAAAATCCAAACATAGAGAACATAGCTAACCTACCATTTTTTAGTTCTTTCACCTTCAA
CTCTGCAAAAGCCTCGGGATCTTCGGCAAGGCCCAAGGGGTCAAAGCTGCCACCTGGGTAGAGTGGGTCAACCACCTCACCGAGAGGTCCACCAGCAATA
CGGTAACCCTCAACAGCACCCATTAAGATAACTTGGACAGCCCATATAGCAAGGATGCTTTGTGCATGGACTAGACTTGGGTTACCCAAGTAGTCAAGCC
CACCCTCACTAAAAATTTGGGATCCTGCCTTGAACCATACAGCCTCGCCGAATTTGACACCATTGCGAGATAAGAGCTCAGGGAAGACACATCCCAAGGC
ACCCAACATAGCCCATCTACTGTGGATGACCTCGAGTTCACGGTTTTTGGCAAATGTCTCTGGGTCAGCAGAAAGTCCAGCAGTGTCCCAACCGTAGTCA
CCAGGAAATTCACCGGTGAGGTAGGATGGGGCTTCACCGGAGAATGGGCCCAAGTACTTGACACGGTCTGGACCGTACCAAGGACTTCCAGAAGGAACAG
ACTTCTTGGTGGTTGCTTTCCTCATTGCTACACCAATTCC