Detailed information on CNT30146271


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30531958Medicago truncatulaEucalyptus grandis42.895.8383.87217reverse complement
CNT30273023Medicago truncatulaChenopodium quinoa21.9423.2786.49111reverse complement
CNT30730237Medicago truncatulaCorchorus capsularis42.6923.0384.26216forward
CNT30712294Medicago truncatulaGlycine max26.8817.8292.65136forward
CNT30569543Medicago truncatulaActinidia chinensis23.122.4488.89117reverse complement
CNT30236385Medicago truncatulaBrassica oleracea23.124.3184.62117reverse complement
CNT30152193Medicago truncatulaPrunus persica25.89385.5131reverse complement
CNT30725282Medicago truncatulaLupinus angustifolius42.6935.5388.89216forward

Expression of CNT30146271

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MMILNGSKNIESHFLCIRMKSNKINYKEKRTFNPRLENIFHPILKRAQKTNLIEF*

Sequence

>CNT30146271
TATTACCTATAGTTAACAGATAGTATGATGATTTTAAATGGCAGTAAAAATATTGAGTCTCATTTTCTATGTATAAGAATGAAGTCAAATAAAATAAATT
ATAAAGAGAAGAGGACATTTAACCCAAGATTGGAGAATATTTTTCATCCTATTTTGAAGCGGGCTCAAAAGACCAACCTTATTGAGTTTTAGTTATCATT
TGTATGATCCTAGATGTTAAAATAAGGGGTTAATAAAAAAAAGAGTGGATGGTTAGAAACACCAAGATACACAAAGGATTAGTAACACAGATTTTGTAAA
TTATCCAAAAGACAATTTACGCATAATAGAAAAAGAATACTAATTGGGGCTTTAAGTTGGTAGAAAAAATCAAGCAGTACTCCCCATAACTCCGATCCAG
AGTATGCTTCCATCCACCGATTAAATAAATTACTATCAGGAACGAAAAAATCCTTTAAAATTTTTTAAGTCCCTTTTTCATAGCACAAACAAAGAAGAAT
AGGAAC