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Detailed information on CNT30146219


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7DMP0|CALM2_SOLTU, E-value = 8e-33

BLAST vs NONCODE:
NONPOPT000052, E-value = 1e-48

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693832Medicago truncatulaOryza sativa66.137.9885.37164forward
CNT30545709Medicago truncatulaIpomoea triloba37.910.0687.2394forward
CNT30378266Medicago truncatulaArabidopsis thaliana56.4541.0684.29140forward
CNT30617482Medicago truncatulaSesamum indicum64.9210.0185.09161forward
CNT30504265Medicago truncatulaNicotiana attenuata52.8242.9586.26131forward
CNT30156599Medicago truncatulaPistacia vera64.5221.2286.25160forward
CNT3097357Medicago truncatulaSolanum tuberosum64.928.0584.47161forward
CNT30387589Medicago truncatulaTriticum turgidum42.745.0989.62106forward
CNT30172308Medicago truncatulaTrifolium pratense20.163.589050forward
CNT30311950Medicago truncatulaCamelina sativa64.5222.1983.12160forward
CNT3014113Medicago truncatulaZea mays43.5523.1386.11108forward
CNT30625935Medicago truncatulaDaucus carota53.239.2984.85132forward
CNT30367748Medicago truncatulaSorghum bicolor40.7325.9687.13101forward
CNT30104901Medicago truncatulaOryza longistaminata66.1310.1385.37164forward
CNT30149356Medicago truncatulaBrachypodium distachyon43.954.6786.24109forward
CNT30576402Medicago truncatulaOryza barthii43.1514.2186.92107forward
CNT30116198Medicago truncatulaOryza nivara35.896.7489.8989forward
CNT3039761Medicago truncatulaMarchantia polymorpha51.2111.4382.68127forward

Expression of CNT30146219

Peptides detected in this lncRNA

>peptide 1 (39 aa)
LHLPGHEVKKLGEVNSTIPISIYFIDHVLKLCLSWVLPQ*

>peptide 2 (31 aa)
MQPASSHHIYINQQQIYSFINSFPYMACCLLS

Sequence

>CNT30146219
CCTTCATCTTCCTGGCCATGAGGTTAAGAAACTCGGGGAAGTCAATAGTACCATTCCCATCAGCATCTACTTCATTGATCATGTCCTGAAGCTCTGCCTC
AGTTGGGTTTTGCCCCAATGAACGCATAACAGTTCCAAGCTCCTTGGTTGTGATGCAACCTGCAAGTTCACACCATATATATATTAATCAACAACAAATT
TATAGCTTCATCAACTCATTCCCCTATATGGCTTGTTGTTTATTAAGC