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Detailed information on CNT30146185


BLAST search results

BLAST vs Swiss-Prot:
sp|P00868|RBS1_PEA, E-value = 3e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30543822Medicago truncatulaBrassica napus7.0729.3187.0685forward
CNT30261182Medicago truncatulaBrassica rapa7.0727.2489.4185forward
CNT30605276Medicago truncatulaGossypium raimondii6.8220.7684.1582forward
CNT30422416Medicago truncatulaPapaver somniferum14.1323.2281.76170forward

Expression of CNT30146185

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MSLLVFLVTGKPAEDLRPVNGATKLAETRLTVVTAAEEIKAIFPTPS*

>peptide 2 (45 aa)
MRGLPTSGNPSSTKSNKNMIDYILNYICKIFLHGHSIRFYHVHVC*

Sequence

>CNT30146185
AATACATATTAACCAAAAATACAAGATGAAGAAATATCAAAAAACATAAAACAAATGGGAAATATAGTTCTTACAATGGTCAAGTACAAACAAAGTAGTA
ATAAAGGGTGGTGCATATATCAAACTTAGTAGGATGATCTTGATGATGAAATATCAAAAAACATAAACAAATGGGAAATATATAGTTCTTACAATGGTCA
AGTACAAACAAAGTAGTAATAAAGGGTGGTGCAAATATCAAACTTAGTAGGTTGCTGGTGTGTGAGCAATGAAACTAATGCACTGCACTTGACGAACATT
GTCAAATCCAATGATTCTGATGAATGATTCTGGGTAAGCAGCTTTAGCTTCAGCAAGCTCCTTCAACACTTGAGAAGAATCGGTGGCTCCGAACAAAGGC
AACTTCCACATTGTCCAGTAACGTCCATCATAGTATCCTGGTGAACTGTGGTTCTCACGGTAGACAAATCCTTTCTATATAACACAAAACAAATTAACAC
ATCAACCCTACAAACTTCATCACTCGAAACACAAATTCGGATTATCTGAAGTCAGAAATTCTCCGCATTCACGGAGTCGGCACATCATGCAGTTGTTGGA
TCCATATCAAATTCCAACGACCAATGATGTACCGATCGAGTGAATGAGAGGATTACCGACTTCAGGCAATCCAAGTTCCACAAAAAGCAATAAAAATATG
ATAGACTATATATTAAACTACATATGTAAAATATTTTTACATGGTCATTCAATCAGATTTTACCACGTACATGTTTGTTAAGATATTTTAGGAATAAATG
TATGCAATAAAGTGGCTAGTATAAAATCTAATTGATTGTATGTGTAAAAAAGTTTTTCACCGATAGTGTATAGTACTTAAACTCTAAATTAAGAAGAAGA
AAAAAAGTTGCAATGTAAATAGATTAACCTCAAGCTCAAATTCCAAACAAGGAACCCATCCCTTCCTGATAAGGTATTCTACTTCCTTAGCCAATTGATC
CTCAGTAAGGGGTAATGTCATTGTTGGTCTTCTTGGTCACTGGGAAACCAGCTGAGGATTTGAGACCGGTGAATGGAGCAACCAAGTTAGCGGAGACGCG
GTTAACGGTGGTGACAGCGGCGGAGGAGATCAAAGCCATTTTTCCTACTCCTTCTTAGTTCACCAAGTACTCAACTTTTGCTTCTACTGCTTATTGCTTC
AAC