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Detailed information on CNT30146180


BLAST search results

BLAST vs Swiss-Prot:
sp|P27490|CB28_PEA, E-value = 1e-165

BLAST vs NONCODE:
NONMTRT001605, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30616124Medicago truncatulaSesamum indicum67.0856.4483.54644forward
CNT30269327Medicago truncatulaChenopodium quinoa55.2160.5785.09530forward
CNT30504491Medicago truncatulaNicotiana attenuata68.1268.9985.93654forward
CNT30709101Medicago truncatulaGlycine max52.659.3483.37505forward
CNT30508942Medicago truncatulaSolanum lycopersicum68.3362.4285.06656forward
CNT30173250Medicago truncatulaTrifolium pratense60.150.0491.85577forward
CNT30623258Medicago truncatulaDaucus carota68.2366.4382.29655forward

Expression of CNT30146180

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MGQSFHLGRVGRLPHQEVHQQYGNPQQHPLR*

Sequence

>CNT30146180
TTGAGAAAGCGATGTATTACTGGTGATATGATAGTAAAGAATATTTTGGAAGAATAATTTACATTTCTTGCATGATCATCATTAACATTCATTGCATTGG
CACATTGTAATATGTATTTCAGTCGCTAAATTGGCACAAACTTGAAGAAAGATCTAAATGCACCGAATATTTCACTAAATTAATAACACGAAATTCGCAC
TCTTGTATGAGCTAGTAACTTAACATAGTTTTTATGAAGTTTTTGCTCACTTTCCGGGGACAAAGTTTGTGGCAAAGGCCCAAGCGTTGTTGTTGACGGG
GTCAGTGATATGGTCGGCAAGGTTCTCTAGAGGTCCCTTTCCGGTTACAATGGCCTGAACGAAGAATCCAAACATAGAGAACATAGCTAGCCTACCATTC
TTAAGTTCTTTCACCTTTAACTCTGCAAAAGCCTCTGGGTCGTCAGCGAGGCCCAATGGGTCAAAGCTTCCACCTGGGTAGAGTGGGTCGACTACCTCAC
CAAGAGGTCCACCAGCAATACGGTAACCCTCAACAGCACCCATTAAGATAACTTGGACAGCCCATATAGCAAGGATGCTTTGTGCATGGACTAGACTTGG
GTTACCCAAGTAGTCAAGCCCACCCTCACTAAAAATTTGGGATCCTGCCTTGAACCATACAGCCTCGCCGAATTTGACACCATTGCGAGATAAGAGCTCA
GGGAAGACACATCCCAAGGCACCCAACATAGCCCATCTACTGTGGATGACCTCGAGTTCACGGTTTTTGGCAAATGTCTCTGGGTCAGCAGAAAGTCCAG
CAGTGTCCCAACCGTAGTCACCAGGAAATTCACCGGTGAGGTAGGATGGGGCTTCACCGGAGAATGGGCCCAAGTACTTGACACGGTCTGGACCGTACCA
AGGACTTCCAGAAGGAACAGACTTCTTGGTGGTTGCTTTCCTCATTGCTACACCAATTCC