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Detailed information on CNT30146145


BLAST search results

BLAST vs Swiss-Prot:
sp|P00868|RBS1_PEA, E-value = 1e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512567Medicago truncatulaJuglans regia11.1128.2383.05118forward
CNT30402284Medicago truncatulaBeta vulgaris7.8237.987.9583forward
CNT30525466Medicago truncatulaPhaseolus vulgaris16.8560.2784.36179forward
CNT30710826Medicago truncatulaGlycine max18.2722.4883.51194forward
CNT30235444Medicago truncatulaBrassica oleracea9.0435.6983.3396forward
CNT30115242Medicago truncatulaEutrema salsugineum9.620.3685.29102forward

Expression of CNT30146145

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MRGLPTTCNPNSAKCYKNSIDYIFTIYVKWHKVAS*

>peptide 2 (36 aa)
MRYFRNKYIQKSGVMKNLIGCMCKKVFRRRCIILKL*

Sequence

>CNT30146145
CTGGGTTCTTTTGGAAACAAAGCAACATAGTTTATTATTGATAGTTCTCATCCATTCATAATTTCCAAAGGAAATCCGAATACATATTAACCAAAAATAC
AAGATGAAGAAATATCAAAAAACATAAAACAAATGGGAAATATAGTTCTTACAATGGTCAAGTACAAACAAAGTAGTAATAAAGGGTGGTGCATATATCA
AACTTAGTAGGTTGCTGGTGTGTGAGCAATGAAACTAATGCACTGCACTTGACGAACATTGTCAAATCCAATGATTCTGATGAATGATTCTGGGTAAGCA
GCTTTAGCTTCAGCAAGCTCCTTCAACACTTGAGAAGAATCAGTGGCTCCAAACAAAGGCAACTTCCACATTGTCCAGTAACGTCCATCATAGTATCCTG
GTGAACTGTGGTTCTCACGGTAGACAAATCCTTTCTATAAAACACAACAATTCAAACAACAAATTAACACATCAACCGTACAAAATTCATCGCTTGTAAC
ACAAAATCGGATTGTTTGCAGTCAGAAATTCTCCGCATTCATTGAGCCGGCACATCATGTAGTTGTTGGATCCTGATCAAATTCCAACGACCAATGATGT
ACCGGCTGAGTGAATGAGAGGATTGCCGACTACATGCAATCCAAATTCTGCAAAATGCTATAAAAATAGCATAGACTATATATTTACTATATATGTAAAG
TGGCATAAAGTGGCATCATGAGATATTTTAGGAATAAGTATATACAAAAAAGTGGTGTCATGAAAAATCTGATTGGTTGTATGTGTAAAAAAGTTTTTCG
CCGACGATGTATAATACTTAAACTCTAATTTAAAAAGGAAGAAAGAAAGGATTGCAATGTAAATAGATTAACCTCAAGCTCAAATTCCAAACAAGGAACC
CATCCCTTCCTGATAAGGTATTCTACTTCCTTAGCCAATTGATCCTCAGTAAGGGGTGGAAGGTATGAAAGTGTTTCAAACTTCTTCTTGCCAATTGGTG
GCCAAACCTATAAATATTATACATAAAATTGAGTATTAGGGTTAACAAAATTTGACAATCAT