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Detailed information on CNT30146094


BLAST search results

BLAST vs Swiss-Prot:
sp|O65194|RBS_MEDSA, E-value = 3e-61

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727195Medicago truncatulaCorchorus capsularis42.8313.4381.19218forward
CNT30712618Medicago truncatulaGlycine max42.2436.8282.79215forward
CNT3083811Medicago truncatulaVigna radiata21.028.2184.11107forward
CNT3077965Medicago truncatulaBrassica juncea37.9223.0681.87193forward
CNT30613234Medicago truncatulaArabis alpina37.9233.8682.9193forward
CNT30625551Medicago truncatulaDaucus carota38.912.1283.84198forward
CNT30620550Medicago truncatulaCajanus cajan20.638.7686.67105forward
CNT30335392Medicago truncatulaCynara cardunculus21.0213.1389.72107forward

Expression of CNT30146094

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MGNIVLTMVKYKQSSNKGVVQISNLVGCWCVSNETNALHLTNIVKSNDSDE*

Sequence

>CNT30146094
GGTTCTTTTGGAAACAAAGCAACATAGTTTATTATTGATAGTTCTCATCCATTCATAATTTCCAAAGGAAATCCGAATACATATTAACCAAAAATACAAG
ATGAAGAAATATCAAAAAACATAAAACAAATGGGAAATATAGTTCTTACAATGGTCAAGTACAAACAAAGTAGTAATAAAGGGGTGGTGCAAATATCAAA
CTTAGTAGGTTGCTGGTGTGTGAGCAATGAAACTAATGCACTGCACTTGACGAACATTGTCAAATCCAATGATTCTGATGAATGATTCTGGGTAAGCAGC
TTTAGCTTCAGCAAGCTCCTTCAACACTTGAGAAGAATCGGTGGCTCCGAACAAAGGCAACTTCCACATTGTCCAGTAACGTCCATCATAGTATCCTGGT
GAACTGTGGTTCTCACGGTATTCTACTTCCTTAGCCAATTGATCCTCAGTAAGGGGTGGAAGGTATGAAAGTGTTTCAAACTTCTTCTTGCCAATTGGTG
GCCAAACCT