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Detailed information on CNT30146071


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30544306Medicago truncatulaBrassica napus9.9320.9286.373forward
CNT30479805Medicago truncatulaArabidopsis halleri8.4420.3990.3262forward

Expression of CNT30146071

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MKMIDSSQSWNPLNISRNDGEQVVSERITEMLC*

Sequence

>CNT30146071
TGCACTAAAATTCAAGAGTGAGTTGGCTTCCATTAAATAAAGCAAAATGCCTTAATAATGTCAAGTGAGATGTATTGTACACATTCAAGATTGGATAAAA
AGCATGAAAATGATTGACTCCTCACAGAGTTGGAACCCTCTCAACATTTCCAGAAATGACGGTGAGCAAGTTGTTTCCGAAAGGATCACTGAGATGCTTT
GCTAACCCTAATGGATCGAATGGACCACCTGGGTGAAACTTGTCTTCCAATTCCTGAAAGATATAGGTGACAATTTGTAAGTCATTGTAATGTATAAGTG
ATTATGTATAAGCTATTTCTAGATCAAAAGATAAAATAAAGTCAAATTGTTTTCGTATAAGCTTTAAATTGTTTTCATAAACTATCATAGAGAGCTTTGG
AAGTAAGCTGAAAACAGCTTACGGACATGTTCCTAACACTGTTTTCATAAACTAACCCCAAACACTCCCGCAGGTGCTTCTTTTAGTAGTTAAGCTCAAA
TAAGTCAAATCAAAAAGGCTCTAAAATGGTTCATTTGGATAAATAATAACTTTCCTTTAGTAAAAAGAGTTTAATAACAATATATTGTCAGCGCAAAATA
CATTTGATCATCATGATATCGTGTTATAAAATCAATCCGTAAAACCGGACAGAGATATCTACATAGTGAGATATGATTTTTTTTTTTTTTTTGTGTAAAA
TGGCTTTTGCATTGTTAGTGTATAGTAGTTAAATT