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Detailed information on CNT30146054


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3ECH2|LRL28_ARATH, E-value = 7e-61

BLAST vs NONCODE:
NONMTRT001586, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30525508Medicago truncatulaPhaseolus vulgaris15.4496.3180.38209forward
CNT30629487Medicago truncatulaVigna unguiculata32.3579.7881.05438forward
CNT3098801Medicago truncatulaSolanum tuberosum6.1322.8785.5483forward
CNT3084079Medicago truncatulaVigna radiata34.3456.5781.08465forward

Expression of CNT30146054

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MKHKKNMQGSTETETKTSQKLPMQSTKRRGASHI*

>peptide 2 (36 aa)
MLSFLGQSFASPKSEIFGQKFSSKRILCGFMSKCKIR

>peptide 3 (37 aa)
MHHKPTIVILLAILSSSVSITPSGLKLLPSSSLLYTQ*

>peptide 4 (46 aa)
ADPKILRYYPITLRTYKGSKPKQLINTSFFHHFFFFNLFSFYFVFA*

Sequence

>CNT30146054
CTGCGGATCCTAAAATCCTAAGGTATTACCCCATCACTCTACGCACATATAAGGGCTCAAAGCCGAAACAACTCATAAACACCTCTTTTTTTCATCATTT
TTTTTTTTTTAATCTTTTCTCTTTTTATTTTGTGTTCGCTTGAACAGAGACTAACATCACCCACACTAAAGTTCCACATCCACCTACCCACAAGAAAAAA
CCTCCCTACATCGATCAAAGTTGCCAACGCAGCAAGAAGAAACCATCATAAACCATCTATCTAAAATCAAATTCATAGCAAAAGATACTAGGAACACAGA
AACATGAAGCACAAAAAGAATATGCAAGGCAGCACCGAAACAGAAACAAAAACATCACAAAAACTGCCAATGCAAAGCACCAAAAGAAGAGGGGCATCAC
ATATATAATAGTAGACAAGTTAAAATATTAGATCACCTAAAAAAAAAATTCGATGCTATTATTTTTGGAGAATATGAATATTTTAATCATATACCTAATA
TTTTCATTACACATATTAAGGATATGACTTAATCACGACTTACTAGTTACTTCCACATAAGATAAAATCATTTTCTAGTATAGCTTGTTCTCCATTTGTA
GCATACGCAGCAACCAACTTCTAAATGATTTAAGATGATAACATTATGAATTGTTCATGACTTTGCATAAGTATAAAAACTATTCGAGACATACACTTGA
ACCTAATTTCTTCACAAGATGATTAAAAGGGTGGAGAGTGTCTTCATTTGAAGAGGTTACCAACTCTGATTAAAAGATATATAACAATTATACTTACCCT
CAAATATTAAGACTTAAAAGACTCTGATATTGACCTAGTAGGTGAAGAAAGATATGGTTTAGGTGGTATTTCAAGTAAATTCATGTTAACTTCTAACATT
TCAATCACTTTACTCATTGTAGGTCTATCACTTGGAAATGTTTGAATGCACCATAAACCCACAATTGTCATTCTCCTTGCAATCTTGTCTTCTTCTGTAT
CCATAACTCCATCAGGTCTCAAATTACTACCAAGCTCAAGCCTATTGTATACCCAGTGAGGAAAGTATATCTCACTTGTGAGACTTGCATCAGCATTAAT
GTTTTTCCTCCCTCCAACCATTTCCAGCAACATCATTCCATAACTATAAACATCGGACTTGTATGAAACTCCTCCAAAATGTCTATTCCACATTTCTGGA
GCTACATATCCCATAGTCCCTCTTTGATCTGACATCGAAATAATGCTCTCGTTCCTTGGACAAAGTTTTGCAAGTCCAAAATCTGAAATCTTTGGACAAA
AATTCTCATCTAAAAGAATATTATGTGGTTTTATGTCGAAATGTAAAATTCGAG